Научная статья на тему 'Efficacy of Staphylococcus aureus Vaccine in Chicken'

Efficacy of Staphylococcus aureus Vaccine in Chicken Текст научной статьи по специальности «Фундаментальная медицина»

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Journal of World's Poultry Research
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Blaz / ClfA / PCR / Sequencing / Staphylococcus aureus / Vaccine

Аннотация научной статьи по фундаментальной медицине, автор научной работы — Abeer S. El-Maghraby, Shereanaziz, Abeermwafy

Staphylococcus aureus is considered one of the most important pathogens causing septic arthritis in poultry with significant economic losses. This study aimed to evaluate the efficacy of a locally prepared S. aureus vaccine against staphylococcal arthritis in poultry. Out of 78 samples collected from infected chickens showing clinical signs bumble foot, 10 field isolates were detected and confirmed phenotypically by culturing, Gram staining, biochemical and molecular identification to be S. aureus in prevalence of 12.82%. Molecular identification of clumping factor A (ClfA) and blaZ genes of S. aureus isolates revealed that the PCR amplification with ClfA and blaZspecific primers conducted with genomic DNA resulted in products of approximate size 638 bp and 833 bp, respectively. Phylogenetic tree for S. aureus ClfA virulence gene partial sequences was generated using maximum likelihood, neighbour joining and maximum parsimony in MEGA6. It showed clear clustring of Egyptian isolated strain (S. aureus ASM strain) and different S. aureus strains uploaded from GenBank. Sequence identities between the Egyptian isolated strain (S. aureus ASM strain)and different S. aureus strains uploaded from GenBank revealed 99.5% to 100% homology. Also, there was identity and homology in S. aureusblaZgene nucleotide sequence in the Egyptian isolated strain (S. aureus ASM strain)and the different S. aureus strains uploaded from GenBank revealed 96.1% to 98.9% homology. Phylogenetic tree for S. aureusblaZβ-lactamases resistant gene partial sequences showed clear clustring of the Egyptian isolated strain (S. aureus ASM strain)and different S. aureus strains uploaded from GenBank. The results of humoral immune response revealed that the geometric mean antibody values against locally prepared S. aureus vaccine measured by indirect hemagglutination test increased from 1st week post vaccination gradually till reached maximum level (322.5) at 6th week post boostering. The results showed an increased humoral antibody production in vaccinated group that was capable of preventing establishment of new S. aureus infection in vaccinated group compared to control group. The mortality rates in unvaccinated group was higher than that of vaccinated group were (42.5%, vs. 7.5%) at 1st and 2nd week post challenge (39.1% vs. 5.4%).The protection % in challenge assay of the prepared S. aureus vaccine was (92.5% and 87.5%) at 1st and 2nd week post challenge respectively. It could be concluded that the prepeared vaccine was safe, potent and protect birds against S. aureus infection.

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Текст научной работы на тему «Efficacy of Staphylococcus aureus Vaccine in Chicken»

JWPR

Journal of World's Poultry Research

2020, Scienceline Publication

J. World Poult. Res. 10(2S): 203-213, June 14, 2020

Research Paper, PII: S2322455X2000026-10 License:CC BY 4.0

DOI: https://dx.doi.org/10.36380/jwpr.2020.26

Efficacy of Staphylococcus aureus Vaccine in Chicken

Abeer S. El-Maghraby1*, Shereanaziz2 and AbeerMwafy3

'Central Laboratory for Evaluation of Veterinary Biologies, Abbasia, Cairo, Egypt.

2Veterinary Serum and Vaccine Research Institute (VSVRI), Abbassia, Cairo, Egypt.

3Department of Microbiology, Faculty of Veterinary Medicine, El-Wady El-Gaded University, Cairo, Egypt.

Corresponding author's Email: abeer.maghraby17774@gmail.com; ORCID: 0000-0002-4217-0206

Received: 12 Feb. 2020 Accepted: 23 Mar. 2020

ABSTRACT

Staphylococcus aureus is considered one of the most important pathogens causing septic arthritis in poultry with significant economic losses. This study aimed to evaluate the efficacy of a locally prepared S. aureus vaccine against staphylococcal arthritis in poultry. Out of 78 samples collected from infected chickens showing clinical signs bumble foot, 10 field isolates were detected and confirmed phenotypically by culturing, Gram staining, biochemical and molecular identification to be S. aureus in prevalence of 12.82%. Molecular identification of clumping factor A (ClfA) and blaZ genes of S. aureus isolates revealed that the PCR amplification with ClfA and blaZspecific primers conducted with genomic DNA resulted in products of approximate size 638 bp and 833 bp, respectively. Phylogenetic tree for S. aureus ClfA virulence gene partial sequences was generated using maximum likelihood, neighbour joining and maximum parsimony in MEGA6. It showed clear clustring of Egyptian isolated strain (S. aureus ASM strain) and different S. aureus strains uploaded from GenBank. Sequence identities between the Egyptian isolated strain (S. aureus ASM strain)and different S. aureus strains uploaded from GenBank revealed 99.5% to 100% homology. Also, there was identity and homology in S. aureusblaZgene nucleotide sequence in the Egyptian isolated strain (S. aureus ASM strain)and the different S. aureus strains uploaded from GenBank revealed 96.1% to 98.9% homology. Phylogenetic tree for S. aureusblaZfi-lactamases resistant gene partial sequences showed clear clustring of the Egyptian isolated strain (S. aureus ASM strain)and different S. aureus strains uploaded from GenBank. The results of humoral immune response revealed that the geometric mean antibody values against locally prepared S. aureus vaccine measured by indirect hemagglutination test increased from 1st week post vaccination gradually till reached maximum level (322.5) at 6th week post boostering. The results showed an increased humoral antibody production in vaccinated group that was capable of preventing establishment of new S. aureus infection in vaccinated group compared to control group. The mortality rates in unvaccinated group was higher than that of vaccinated group were (42. 5%, vs. 7.5%) at 1st and 2nd week

challenge assay of the prepared S. aureus vaccine was post challenge

respectively. It could be concluded that the prepeared vaccine was safe, potent and protect birds against S. aureus infection.

Key words: Blaz, ClfA, PCR, Sequencing, Staphylococcus aureus, Vaccine.

Staphylococcus aureus is regarded as one of the most prevalent pathogens that can cause great economic losses in poultry sector. In poultry, S. aureus causes many clinical syndromes as tenosynovitis, omphalitis, femoral head necrosis, bumble foot, infected hock and stifle joints (Sulemian et al., 2013). Different antimicrobial agents such as fi-lactamases, macrolides, aminoglycosides and tetracyclines are extensively used in poultry for treating of staphylococci and other infections which lead to development of drug resistant strains of bacteria (Nemati et al., 2008). Resistance to penicillin as developed by staphylococci is mediated by two mechanisms: either by

the secretion of an fi-lactamases enzyme, encoded by the blaZ gene in plasmid or chromosome, which inactivates the antibiotic by hydrolysis of its fi-lactam ring, or by the production of a penicillin binding protein (PBP2A) encoded by gene mecA (Liu, 2009). The need for S. aureus vaccine was mainly determined by the economic loss in poultry farming resulting from arthritis in poultry Fluit et al. (2012). Prophylaxis via prevention of infection by using antibiotics is of low fee in case of antibiotic resistant strains, as penetration through the infected joints no way for theraby of arthritis caused by S. aureus. Vaccination is the solely way for protection against staphylococcal arthritis in poultry. The main objective of this study was to evaluate the efficacy of a

QQEit9Ehi9BI3§rB El-Maghraby AS, azizSh and Mwafy A (2020). Efficacy of Staphylococcus aureus Vaccine in Chicken. J. World Poult. Res., 10 (2S): 203-213. DOI https://dx.doi.org/10.36380/jwpr.2020.26

locally prepared S. aureus vaccine against staphylococcal arthritis in poultry.

Baird Parker agar media then incubated at 37°C for 24 h., according to Quinn et al. (2002).

MATERIALS AND METHODS Ethical approval

The Institutional Animal Care and Use Committee (IACUC) has approved animal use protocol used in this study (Vet. CU. 20022020146).

and

isolation

of

Samples collection

Staphylococcus aureus

A total of 78 samples (46 samples from layers farms and 32 samples from broiler farms) were collected from private poultry farms in Sharkia, Qalubia, Behira and Dakahlia governorates, Egypt. The samples taken from birds having swollen hock joints, wings and foot pads. These samples were taken under aseptic conditions according to Jordan et al. (2002). Isolation of S. aureus was obtained by culturing these samples on tryptic soy broth (TSB) containing 70 mg/ml NaCl, then culturing from this broth on blood agar, mannitol salt agar, and

Identification of Staphylococcus aureus isolates

Isolated colonies of S. aureus were identified by classical identification as microscopical examination, biochemical reactions using API-Staph system (Table 1) and pathogenicity test according to Quinn et al. (2002), Taponen et al. (2008), Löpez-Malo et al. (2005), El- jakee et al. (2013), Kateete et al. (2010) and Toply and Wilsons (1993). Phenotypic characterization of the same isolation was applied to detect coagulase test according to Quinn et al. (2002), and hemolysis assay according to Koneman et al. (1997).

Molecular identification of Staphylococcus aureus

All the identified S. aureus isolates were examined by PCR for the presence of clumping factor A (ClfA) virulence associated gene then detected the presence of S. aureus (blaZ) gene in all field isolates. The primers sequences and PCR product sizes are shown in table 2.

Table 1. Results of biochemical identification of Staphylococcus aureususing API-Staph system

Test ADH URE VP GLU MAN SAC MAL FRU MNE LAC TRE XLT MEL NIT PAL RAF XYL MDG NAG

Result + + + + + + + + + + + - - + + - - - +

(ADH) L-arginine, (URE) urea, (VP) VogusProskour, (GLU) D-glucose, (MAN) D-mannitol, (SAC) D-sucrose, (MAL) D-maltose, (FRU) D-fructose, (MNE) D-mannose, (lAC) D-lactose, (TRE) D-trehalose, (XLT) Xylitol, (MEL) D-melibiose, (NIT) Nitrate potassium, (PAL) L-B-naphtyl phosphate, (RAF) D-raffinose, (XYL) D-xylose, (MDG) methyl D-glucopyranoside, (NAG) N-acetyl-glucosamine.

Table 2. Primerssequences, target genes, amplicon sizes and cycling conditions.

Target gene Amplified Primary denaturation Amplification (35 cycles) . Final extension

Primers sequences (5'--3') segment (base pair) Secondary denaturation Annealing Extension Reference

ClfA F: GCAAAATCCAGCACAACAGGAAACGA 638 94° C 94 C 55° C 72° C 72 °C Mason et

R: CTTGATCTCCAGCCATAATTGGTGG 5 min. 30 sec. 40 sec. 45 sec. 10 min. al.(2001)

blaZ F:TACAACTGTAATATCGGAGGG 94° C 94 C 50 °C 72 C 72 °C Bagcigilet

R:CATTACACTCTTGGCGGTTTC 5 min. 30 sec. 40 sec. 50 sec. 10 min. al. (2012)

DNA extraction

DNA extraction from samples was performed using the QIAamp DNA Mini kit (Qiagen, Germany, GmbH) with modifications from the manufacturer's recommendations. Briefly, 200 ^l of the sample suspension was incubated with 10 ^l of proteinase K and 200 ^l of lysis buffer at 56°C for 10 mm. After incubation, 200 ^l of 100% ethanol was added to the lysate. The sample was then washed and centrifuged following the manufacturer's recommendations. Nucleic acid was eluted with 100 ^l of elution buffer.

Oligonucleotide Primer

Primers used were supplied (Germany) are listed in Table 2.

from Metabion

PCR amplification

Primers were utilized in a 25- ^l reaction containing 12.5 ^l of EmeraldAmp Max PCR Master Mix (Takara, Japan), 1 ^l of each primer of 20 pmol concentration, 4.5 ^l of water, and 6 ^l of DNA template. The reaction was performed in an applied biosystem 2720 thermal cycler.

Analysis of the PCR products

The products of PCR were separated by electrophoresis on 1.5% agarose gel (Applichem, Germany, GmbH) in 1x TBE buffer at room temperature using gradients of 5V/cm. For gel analysis, 20 ц1 of the products was loaded in each gel slot. Generuler 100 bp ladder (Fermentas, Thermo, Germany) was used to determine the fragment sizes. The gel was photographed by a gel documentation system (Alpha Innotech, Biometra) and the data was analyzed through computer software.

Phylogenetic and gene sequence analysis of ClfAandblaZ genes of Staphylococcus aureus

PCR products were purified using QIAquick PCR Product extraction kit. (Qiagen, Valencia). Bigdye Terminator V3.1 cycle sequencing kit (Perkin-Elmer) was used for the sequence reaction and then it was purified using Centrisep spin column. DNA sequences were obtained by Applied Biosystems3130 genetic analyzer (HITACHI, Japan), a BLAST® analysis (Basic Local Alignment Search Tool) (Altschul et al., 1990) was initially performed to establish sequence identity to Gen Bank accessions. The phylogenetic tree was created by the MegAlign module of Laser gene DNA Star version 12.1 (Thompson et al., 1994) and Phylogenetic analyses was done using maximum likelihood, neighbor joining and maximum parsimony in MEGA6 (Tamura et al., 2013).

Vaccination and challenge test

Vaccine preparation

The vaccine was prepared according to the methods described by Giraudo et al. (1997), Ahmad and Muhammad (2008) and Raza et al. (2015). From the complete identified isolated Egyptian strain (S. aureus ASM strain), 10 ml from the freshly preperaed culture was streaked on brain-heart infusion agar and incubated at 37°C for 18 h Then, the strain was separately subcultured in brain-heart infusion at 37°C for 24 h.

Preparation of S. aureusbacterin in liquid medium: A culture of well identified strain was prepared from single colony which was scaled up to one TSB medium. Also preparation of S. aureusbacterin on solid medium by cultivation of single colony on BHI agar or TS agar then incubated at 37°C for 24 h The bacterial suspension was centrifuged at (3000 rpm at 4°C for 30 min) to pellet the bacterial cells, after that the bacterial pellets washed and resuspended in 0.15 mol/l PBS (pH 7.2). The culture suspension was examined for purity through Gram's stain

method and by streaked on blood agar. The colony forming unit was determined by plate counting and bacterial concentrations was adjusted to contain 1x 109 cells/ml (Raza et al., 2015). The S. aureus toxin was prepared by taking 10 ml of freshly prepared working solution and incubated into 500 ml of BHI, then incubated at 37°C for 48 h. The supernatant was taken from broth culture by filtration. The bacterial culture was inactivated by adding 0.4% (v/v) formalin (Watson and Davies, 1993), at 37°C for 24-48 h with agitation for 24 hrs, Then, sodium bisulfite was added in a final concentration of 2% to stop the action of formalin. Samples from inactivated bacterial culture were tested for complete inactivation by cultivated on BHI agar media to assure complete inactivation where no growth was found on any of the inoculated media after incubation at 37C for 24 h to 7 days of incubation, according to OIE (2014).

Determination of the Minimum Lethal Dose (MLD) of Staphylococcus aureus filtrate in mice

Double fold serial dilutions of the S. aureus filtrate were prepared in PBS, 0.1 ml of each dilution was injected into each of three experimental mice weighting about 25 grams. Mice were kept under observation for 3 days post inoculation and the MLD (which is the minimum amount of toxin that killed all mice in 3 days) was determined according to Smith (1975) and Smyth (1975).

Vaccine formulation according to (Ahmed 2012)

The inactivated S. aureus bacterin and toxoid vaccine was prepared as an oil emulsion vaccine using Montanidetm ISA 71 VG adjuvant (SEPPIC, France) in a ratio of 71 adjuvant: 29 antigen. Merthiolate (Thiomersal) was used in a final concentration of 1: 10,000 as a preservative. The dose of the prepared vaccine was 0.5ml contain 1x109 CFU and MLD50 of toxoid.

Quality control of the prepared Staphylococcus aureus vaccine

The prepared S. aureus inactivated oil emulsion vaccine was tested for sterility test, safety test, complete inactivation and potency according to the Standard International Protocols as described by the OIE (2017).

Experimental design

One hundred and sixty, 1-day-old SPF chickens were obtained from Nile- SPF farm, KomOshim project, El-Fayoum Governorate, Egypt. The chickens were housed in SPF isolator units in specific CLEVB animal care building with water and feed provided ad-libitum. At

3 weeks of age, blood samples were collected for serological examination to insure their freedom from maternally derived antibodies against S. aureus, 3 weeks old SPF broiler chickens were divided into 3 groups, chickens of group (1) of 80 birds injected S/C with 0.5ml of previously prepared oil adjuvanted S. aureus vaccine in the middle part of the neck two times with 3 weeks intervals, the groups 2 and 3 ,each group consisted of 40 birds, as control positive and negative groups wereleft unvaccinated.

Serum samples were obtained regularly from vaccinated and unvaccinated groups before immunization, weekly for 3 weeks after the primary vaccination and every week post boostering for 6 weeks, and stored at -20 °C untill used.

Challenge test

Birds of groups 1 and 2 were challenged 4 weeks after the booster dose by oral administration of 1ml of broth culture containing 1x109 CFU of reference S. aureus virulent strain obtained from Veterinary Serum and Vaccine Research Institute (VSVRI), Abassia. The inoculated chickens were observed for one month. The degree of protection was assessed according to the severity of the clinical signs, the mortality and the recovery of the challenge organisms from fecal samples were assayed according to Paiva et al. (2009).

Detection of the shedding of Staphylococcus aureus in fecal samples

One week after the challenge and for 4 weeks, cloacal swabs were collected from each of the infected as well as control groups and examined bacteriologically for the presence of S. aureus weekly during one month after challenge according to Ahmed (2012) and Raza et al. (2015). Suspected colonies were identified morphologically and biochemically.

Antibody titers

Indirect haemagglutination test for measuring antibody titers in vaccinated chickens were done according to Rahman et al. (2005).

RESULTS

Isolation and identification of Staphylococcus aureus field isolates

Out of a total number of 78 samples were collected from infected chicken showing clinical signs of planter

abscess or bumble foot, ten locally field isolates were detected and confirmed phenotypically by culturing, Gram staining, biochemical and molecular identification to be S. aureus in prevalence of (12.82%). Gram's staining revealed that the colonies morphology of S. aureus were small to medium sized and golden yellow on BHI agar, while the colonies appeared surrounded by a double zone of beta haemolysis on blood agar plates, on mannitol salt agar, they were yellow color surrounded by yellow halo with yellow colored medium the colonies were typically black smooth with entire margin on Baird Parker agar media.

Phenotypic characterization of some virulence factors as haemolysin production assay and coagulase production.

All ten S. aureus isolates were coagulase positive and produce bata hemolysis.

Molecular identifiction of ClfA and blaZ genes of Staphylococcus aureus isolates

The PCR amplification with ClfA specific primers was conducted with genomic DNA, which resulted in a product of approximate size 638bp (Figure 1).CfA gene was found in all ten (100 %) S. aureus isolates. The PCR amplification with blaZ gene specific primers was conducted with genomic DNA, resulted in a product of approximate size 833 bp (Figure 2). BlaZ gene was present in ten (100 %) S. aureus isolates. Sequence identities between the isolated Egyptian strain (S. aureus ASM strain)and different S. aureus strains uploaded from GenBank revealed that 99.5% to 100% homology. Sequence identities between the Egyptian isolated strain (S. aureus ASM strain)and different S. aureus strains uploaded from GenBank revealed that 96.1% to 98.9%.

Quality control of the preperaed Staphylococcus aureus vaccine

assured that the locally prepared vaccine free from any bacterial (aerobic or anaerobic contaminants) or fungul contamination and safe as there was no local reaction found in all injected chickens.

Antibody titers in vaccinated chickens

The results of humoral immune response revealed that the geometric mean antibody titers against S. aureus values of both groups as shown in table 3. The GMT antibody titer was (16) in the 1st week post vaccination,

and increase gradually at the 2n week (20.16), till reach to maximum level at 6th week was (322.5) as shown in Table 3.

Challenge test

The vaccine showed a considerable survival rate in challenged vaccinated group compared to control group. The mortality rates and survival percentages in groups control and vaccinated are summarized in table 4, the NO. of dead chickens in the 1st week post challenge in the control and vaccinted group were 17 (42.5%) and 3 (7.5%), respectively. The mortality rate in the 2nd week in the control group 9 (39.1%) and vaccinated group 2 (5.4%). Protection or survival (%) till day 7 post challenge (20%) in control group and vaccinated group

(92.5%). Protection or survival (%) till 15 day post challenge (0%) in control group and (87.5%) in vaccinated group as shown in table 4. The challenge protection assay showed a considerable protective immune response of prepared S. aureus vaccine.

Detection of the shedding of Staphylococcus aureus in fecal samples

The results in Table 5 showed that the fecal shedding of chickens challenged with virulent S. aureus strain in group 1 vaccinated with locally prepared oil adjuvantedS. aureus vaccine was 10.8%, 8.5% and 0% in 1st, 2nd, 3rd week post challenge, respectively. Shedding disappeared by the 4th week post challenge.

Table 3.Geometricmean of Staphylococcus aureus antibody titers in sera of chickens vaccinated with locally prepared oil adjuvanted S. aureus vaccine and non-vaccinated groups measured by indirect haemagglutination test.

Time intervals

Geometric mean anti-S. aureus antibody titers

Pre-vaccination

1 St

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1 wpv 2ndwpv 3rdwpv 1st wpb

2nd wpb 3rd wpb

4th wpb 5th wpb 6th wpb

0 16 20.16 32 40.3 50.79 161 256 256 322.5

wpv: week post-vaccination; wpb: week post-boostering

Table 4.Comparison ofmortality ratein chicken groupsunvaccinated and vaccinated with the locally prepared oil adjuvantedStaphylococcus aureus vaccine post challenge with virulent reference Staphylococcus aureus strain

No. of dead birds Mortality rate

Groups Total birds 1st wpc 2ndwpc 3rdwpc 4th wpc 1" week 2nd week 3rd week Total

Vaccinated 40 3 2 0 0 7.5% 5.4% 0% 12.5%

Unvaccinated 40 17 9 8 3 42.5% 39.1% 57.1% 92.5%

wpv: week post- challenge

Table 5.Comparison adj uvantedStaphyloco of rate offecalshedding in chicken groupsunvaccinated and vaccinated with the locally prepared oil ccus aureus vaccinepostchalleng with virulent reference Staphylococcus aureus strain

No. of birds positive for S. aureus isolation/ total No. of living birds

Groups 1stwpc 2ndwpc 3rdwpc 4lhwpc

Vaccinated 10.8% (4/37) 8.5% (3/35) 0% (0/35) 0% (0/35)

Unvaccinated 47.8% (11/23) 57.1% (8/14) 33.3% (2/6) 33.3% (1/3)

wpv: week post- challenge

100

Figure 1. Agarose gel showing PCR amplified product of 638 bp of clumping factor A (ClfA) virulence gene for Staphylococcus aureus, lanes (1) to (10): samples positive for ClfA gene, Lane (Pos.): positive control, Lane (Neg.): Negative control, Lane (L): MW 100bp ladder (DNA marker).

Pos L 10 9 IHH HI 4 3 2 1 Neg

_ —

1000 4- 833 bp

H

100

Figure 2. Agarose gel showing PCR amplified product of 833 bp of ß-lactamase resistant (Blaz) gene for Staphylococcus aureus, lanes (1) to (10): samples positive for Blaz gene, lane (pos.): positive control, lane (Neg.): Negative control, Lane (L): MW 100bp ladder (DNA marker).

Figure 3. Phylogenetic tree for Staphylococcus aureusclumping factor A (ClfA) virulence gene partial nucleotide sequences that was generated using maximum likelihood, neighbor joining and maximum parsimony in MEGA6. It shows clear clustering of the Egyptian isolated strain (S. aureus ASM strain) and different S. aureus strains uploaded from GenBank.

AB245468.1_S-_a.u re u s_N N1

-N G_0 520 65.1_S._a u re u s_pl2:5 8

CP040625_1_S._aureus_JKD6Q04-DR AP019751.1_S._au re u s_J RA3 0 7 -X16471.1 S. aureus Tn4002

GQ90 0378.1_S._a.u re u s_pl25 8 AB245469.1_S__a.u re u s_8 0 s-3 U58139.2_S._au re u s DQ016067.1_S._aureus_E19771 DQ016053.1_S.aureus_Human1154

-DQ016057-1 S. aureus Iceland!

AP003139.1 S. aureus N315

■ NG_055994.1_S._aureus_JH9_pSJH9Q1

N G_0475 34.1 _S __a u re u s_pM W2 DQ 016069.1_S._au re u s_E 1965 8

_DQQ16058.1_S__aureus_Human1091

DQ016055.1_S.aureus_D3900

-AB811795.1_S._au re u s_KU22

DQ016054.1_S._aureus_D3866 ■ N G_05 5 999.1_S ._au re u s_U SA30 0_TC H 95 9

# Staph_au reu s_ASM_st rain

CP035671.1_S._aureus_VB31683 LT992465.1_S._a u re u s_6_LA_232 CP029653.1 _S._au re u s_AR_0470 CP029627.1 S aureus MOK042

0.002

Figure 4. Phylogenetic tree for Staphylococcus aureusp--lactamase (Blaz) resistant gene partial nucleotide sequences that was generated using maximum likelihood, neighbor joining and maximum parsimony in MEGA6. It showed clearclustering of the Egyptian isolated strain (S. aureus ASM strain) and different S. aureus strains uploaded from GenBank.

Percent Identity

99.5 98.6 99.7 98.7

97.8 98.0

0.2 0.2 0.2 0.2

99.5 98.6 99.5 98.6

97.8 97.8

1.4 1.4 1.4 1.4

98.0 98.0

2.2 2.2 1.8 1.8

2.6 3.5 2.1 3.1

1.9 1.9 2.1 2.1

2.2 3.2 2.4 3.4

4.9 4.9 0.3 0.3

5.2 3.9 0.6 1.6

MG321495.1 S. aureus SA.EGY1 KX181S53.1 S. aureus R1/Bov/2015 HÜ424270.1 S. aureus C2 HÜ424283.1 S. aureus FFP221 HQ424256.1 S. aureus 57/92 HQ424254.1 S. aureus CA-548 HQ424284.1 S. aureus E2260 HQ424263.1 S. aureus KD6505 HQ424262.1 S. aureus NCTC 8325 HQ424289.1 S. aureus BTN2164 HQ424282.1 S. aureus D472 AP019543.1 S. aureus KG-18 HQ424288.1 S. aureus BK519 HÜ424280.1 S. aureus D115 HQ424260.1 S. aureus H560 HÜ424281.1 S. aureus NOT38 HQ424268.1 S. aureus GA-442 HQ424274.1 S. aureus C13 HQ424287.1 S. aureus HT2001634 HQ424271.1 S. aureus C56 JQ278702.1 S. aureus RFESA0331 HQ424285.1 S. aureus D470 HQ424286.1 S. aureus D22 CP009361.1 S. aureus ATCC 25923 JQ278705.1 S. aureus PFESA0352 S. aureus ASM strain

Figure 5. Nucleotide sequence distance of Staphylococcus aureusclumping factor A (ClfA) virulence gene between the Egyptian isolated strain (S. aureus ASM strain) and different S. aureus strains uploaded from GenBank

1 2 3 4 6 6 7 8 9 10 11 12 13 14 16 16 17 18 19 20 21 22 23 24 25

1 100 0 100 0 100.0 100.0 100.0 99.8 99.4 100.0 100.0 98.7 98.1 98.0 981 97 5 98.1 98.1 98.1 981 96.5 95.2 95.2 95.2 95.2 961 1

2 0.0 ■ 100.0 mo 100.0 100.0 99.8 99.4 100.0 100.0 98.7 98.1 98.0 98 1 97.5 98.1 98.1 98.1 98 1 96.5 95.2 95.2 95.2 95.2 961 2

3 0.0 0.0 100.0 100.0 100.0 99.8 99.4 100.0 100.0 98.7 98.1 98.0 98 1 97.5 98.1 98.1 98.1 98 1 96.5 95.2 95.2 95.2 95.2 961 3

4 0.0 0.0 o.o 100.0 100.0 99.8 99.4 100.0 100.0 98.7 98.1 98.0 98 1 97 5 98.1 98.1 98.1 981 96.5 95.2 95.2 95.2 95.2 961 4

5 0.0 0.0 o.o 0 0 ■ 100.0 99.8 99.4 100.0 100.0 98.7 98.1 98.0 98 1 975 98.1 98.1 98.1 981 96.5 95.2 95.2 95.2 95.2 961 5

6 0.0 0.0 0.0 0 0 0 0 99.8 99.4 100.0 100.0 98.7 98.1 98.0 98 1 97 5 98.1 98.1 98.1 981 96.5 95.2 95.2 95.2 95.2 96.1 6

7 0.2 0.2 0.2 02 0.2 0.2 ■ 99.2 99.8 998 98.5 97.9 97.7 979 97.3 97.9 97.9 97.9 979 96 3 95.0 95.0 95.0 95.0 95 8 7

8 0.6 0.6 0.6 0.6 0.6 0.6 0.8 99.4 994 98.1 97.5 97.4 975 969 97.5 97.5 97.5 97.5 96 0 94.6 94.6 94.6 946 955 8

9 0.0 0.0 0.0 0 0 0.0 0.0 0.2 0.6 100.0 98.7 98.1 98.0 98 1 97 5 98.1 98.1 98.1 981 96.5 95.2 95.2 95.2 95.2 961 9

10 0.0 0.0 0.0 0 0 0 0 0.0 0.2 0.6 0 0 98.7 98.1 98.0 98.1 97.5 98.1 98.1 98.1 98.1 96.5 95.2 95.2 95.2 95.2 961 10

11 1.3 1.3 1.3 13 13 1.3 1.6 1.9 13 13 99.4 99.3 994 98 8 97.5 99.4 99.4 994 97 6 96.1 96.1 96.1 961 96 9 11

12 1.9 1.9 1.9 19 1.9 1.9 2.2 2.6 1.9 19 0.6 99.9 100.0 98 5 96.9 100 0 100.0 100.0 97 0 95.5 95.5 95.5 95.5 96 5 12

13 2.1 2.1 2.1 21 21 2.1 2.3 2.7 2.1 21 0.7 0.1 ■ 99 9 98 3 96.8 99.9 99.9 99 9 96 9 95.4 95.4 95.4 954 96.4 13

14 1.9 1.9 1.9 1.9 1.9 1.9 2.2 2.6 19 19 0.6 0.0 0.1 98 5 96.9 100.0 100.0 100.0 970 95.5 95.5 95.5 95.5 96 5 14

16 2.6 2.6 2.6 26 2.6 2.6 2.8 3.2 26 2 6 1.2 1.6 1.7 16 97.3 98.5 98.5 98 5 97 0 95.4 95.4 95.4 95.4 96 2 15

16 1.8 1.8 1.13 1.8 18 1.3 2.1 2.4 18 18 2.4 3.1 3.2 3.1 27 96.9 96.9 969 95.7 94.3 94.3 94.3 943 95.1 IE

17 1.9 1.9 1.9 19 1.9 1.9 2.2 2.6 19 19 0.6 0.0 0.1 0.0 16 3.1 ■ 100.0 100.0 97 0 95.5 95.5 95.5 955 96 5 17

18 19 19 1.9 1 9 1 9 19 2.2 2 6 1 9 1 9 0 6 00 0 1 00 1 6 31 00 10 O.O 97 0 95.5 95.5 95.5 95 5 96 5 18

19 1.9 1.9 1.9 19 19 1.9 2.2 2.6 19 19 0.6 0.0 0.1 0 0 16 3.1 0.0 0.0 ■ 97 0 95.5 95.5 95.5 955 96 5 19

20 3.6 3.6 3 6 3 6 3 6 3.6 38 4.2 3 6 3 5 24 3 0 3.2 30 3 0 4 3 3.0 3.0 3 0 97 0 97.0 97.0 97 0 97 1 20

21 4.9 4.9 4.9 4.9 4 9 4.9 5.2 6.6 4.9 4 9 4.1 4.7 4.8 4.7 48 5.9 4.7 4.7 47 3 0 ■ 100 0 100.0 100.0 98 9 21

22 4 9 4 9 49 49 49 4 9 5.2 5 6 49 49 41 4.7 48 47 48 5 9 47 47 47 3 0 00 1000 1000 98 9 22

23 4.9 4.9 4.9 49 4 9 4.9 5.2 5.6 49 4 9 4.1 4.7 4.8 4.7 4 8 5.9 4.7 4.7 47 3 0 0.0 0.0 100.0 98 9 23

24 4 9 4 9 49 49 49 49 5.2 5 6 49 49 41 4.7 48 47 48 5 9 47 47 47 3 0 00 00 0 0 98 9 24

26 4.1 4.1 4.1 4.1 41 4.1 4.3 +.7 41 41 3.2 3.5 3.7 3.5 39 5.0 3.5 3.5 3.5 2 9 1.1 1.1 1.1 11 ■ 25

1 2 3 4 5 6 7 8 9 10 11 12 13 14 16 16 IT 18 19 20 21 22 23 24 25

GQ900378 1 a aureus pl258 AP019751 1 S.aureus JRA307 CP040 625.1 S. aureus JK06004-DR AB245469 1 S. aureus 805-3 AB245468 1 3. aureus NN1 U58139.2 S aureus X16471.1S. aureus Tn4002 NGJ52065.1 S. aureus PI258 DC10160671 S aureus E19771 □Q0160531 S aureus Human1154 AP003139.1 S. aureus N215 NGJ47534.1 S. aureus pMW2 AB811795.1 S. aureus KU22 □Q0160691 3 aureus E19658 NGJ55994.1 S. aureus JHS pSJH901 □Q0160571 3 aureus Icelandl DQ016058 1 S aureus Human1091 □Q016055 1 a aureus 03900 DQ0160541 3 aureus D3866 NG_055999 1 S aureus USA300_TQH959 CP035671.1 S. aureus VB31683 LT9924651 S aureus 6_L4_232 CP029653.1 3. aureusARJ470 CP029627 1 S aureus MOKD42 Staph aureus ASM strain

Figure 6. Nucleotide sequence distance of Staphylococcus aureusfi-lactamase (Blaz) resistant gene between the Egyptian isolated strain (S. aureus ASM strain) and different S. aureus strains uploaded from GenBank

DISCUSSION

Among the most important diseases of poultry, S. aureus infection, also called bumble foot, is a common bacterial disease of commercial broilers and layers. It causes significant economic losses through mortality (0-15%) and reduce production performance of birds. Out of a total number of 78 samples were collected from infected chicken showing clinical signs of planter abscess or bumble foot, ten locally field isolates were detected and confirmed phenotypically by culturing, Gram staining, biochemical and molecular identification to be S. aureus in prevalence of (12.82%), this findings agree with Marek et al. (2016) (15.89%) and disagree with Mamzaet al. (2010) (52.5%), (Suleiman et al., 2013) (54%), Abd El-Tawab et al. (2017) (66%), Rasheed (2011) (50.98%). The colonies morphology of S. aureus were small to medium sized and golden yellow on BHI agar, while the colonies appeared surrounded by a double zone of beta haemolysis on blood agar plates, on mannitol salt agar, they were yellow color surrounded by yellow halo with yellow colored medium the colonies were typically black smooth with entire margin on Baird Parker agar media. For the biochemical results, strains revealed that all were identified as S. aureus as shown in table 2. This finding was in accordance with the findings of Topley and Wilson (1990), Selim et al. (1984) and Paul et al. (2014).

Phenotypic characterization of some virulence factors as haemolysin production assay and coagulase

production. All ten S. aureus isolates were coagulase positive and produce bata hemolysis, these two factors are important in phagocytosis and infection due to toxins production respectively (Bhanderi et al., 2009 and Cariolato et al., 2008).

Molecular identifiction of ClfA and blaZ genes of S. aureus isolates revealed that the PCR amplification with ClfA specific primers was conducted with genomic DNA, which resulted in a product of approximate size 638bp. clumping factor A (ClfA) gene was found in all ten (100 %) S. aureus isolates these results agree with Nemati et al., (2009) (100%), Erfan and Marouf (2015) (100%) and disagree with Mohamed A. Lebdah et al., (2015) (20%). S. aureus expresses several different proteins including clumping factors A (ClfA) that play an important role in the ability of S. aureus to cause disease Perkins et al., (2001) and Walsh et al., (2008). Clumping factor A (ClfA) is a microbial surface protein that promotes S. aureus binding to fibrinogen, and is associated with septic arthritis and infective endocarditis Elkhatib et al., (2015). The PCR amplification with blaZ gene specific primers was conducted with genomic DNA, resulted in a product of approximate size 833 bp.blaZ gene was present in ten (100 %) S. aureus isolates these finding nearly agree with Bakheet et al. (2018) (74%) and disagree with Ganugula Mohana Sheela (2017) (57.69%).

Phylogenetic and partial gene sequence analysis of ClfAandblaZ genes of S. aureus that was generated using maximum likelihood, neighbour joining and maximum

parsimony in MEGA6, showed clear clustering of isolated Egyptian strain (S. aureus ASM strain) and different S. aureus strains uploaded from GenBank. Sequence distance of S. aureus ClfA virulence gene (Figure 3) was created by the MegAlign module of Laser gene DNA Star. Sequence identities between the isolated Egyptian strain (S. aureus ASM strain) and different S. aureus strains uploaded from GenBank (Figure 5) revealed that 99.5% to 100% homology. When analyzing nucleotide sequence of ClfA gene of the Egyptian isolated strain (S. aureus ASM strain) in the current study showed 100% nucleotide identity with locally isolated Egyptian S. aureus strain SA.EGY1 recovered by Erfan and Marouf (2018) (accession No. MG821495.1). The Egyptian isolated strain (S. aureus ASM strain) showed also 100% identity with the indianS. aureus strain R1/Bov/2015 by Vaidya et al., (2016) (GenBank accession No. KX181853.1). Also showed 99.8% identity with the American S. aureus strain C2 by Murphy et al., (2011) (GenBank accession No. HQ424270.1), and showed 99.7% identity with the American S. aureus strain FFP221 by Murphy et al. (2011) (GenBank accession No. HQ424283.1), American S. aureus strain 57/92 by Murphy et al. (2011) (GenBank accession No. HQ424256.1) and American S. aureus strain CA-548 (GenBank accession No. HQ424254.1). Concerning S. aureus blaZ gene nucleotide sequence analysis revealed great homology and identity between the Egyptian isolated strain (S. aureus ASM strain) and the different S. aureus strains uploaded from GenBank. Phylogenetic tree for S. aureus WaZß-lactamase resistant gene (Figure 4) partial sequences showed clear clustering of the Egyptian isolated strain (S. aureus ASM strain) and different S. aureus strains uploaded from GenBank. Figure 6 shows that sequence distance of S. aureus blaZantibiotic resistant gene was created by the MegAlign module of Laser gene DNA Star. Sequence identities between the Egyptian isolated strain (S. aureus ASM strain) and different S. aureus strains uploaded from GenBank revealed that 96.1% to 98.9%. When analyzing nucleotide sequence of blaZ B-lactamase resistant gene of the Egyptian isolated strain (S. aureus ASM strain) in the current study it showed 98.9% identity with the Ireland S. aureus M0K042 strain recovered by Keane and Cormican 2018), (GenBank accession No. CP029627.1), the American S. aureus strain AR_0470 recovered by Benahmed et al., (2018) (GenBank accession No. CP029653.1) and the German S. aureus isolate 6_LA_232 recoverd by Schleimer et al. (2018) (GenBank accession No. LT992465.1).

Quality control of the prepared S. aureus vaccine assured that the locally prepared vaccine free from any bacterial (aerobic or anaerobic contaminants) or fungal contamination and safe as there was no local reaction found in all injected chickens.

The results of humoral immune response revealed that the geometric mean antibody titers against S. aureus values of both groups as shown in table 3. The GMT antibody titer was (16) in the 1st week post vaccination, and increase gradually at the 2nd week (20.16), till reach to maximum level at 6th week was (322.5) as shown in Table 3. These finding agree with (Raza et al., 2015). The vaccine showed a considerable survival rate in challenged vaccinated group compared to that of control group. The mortality rates and survival percentages in groups control and vaccinated are summarized in table 4, the NO. of dead chickens in the 1st week post challenge in the control and vaccinated group were 17 (42.5%) and 3 (7.5%), respectively. The mortality rate in the 2nd week in the control group 9 (39.1%) and vaccinated group 2 (5.4%). Protection or survival (%) till day 7 post challenge (20%) in control group and vaccinated group (92.5%). Protection or survival (%) till 15 day post challenge (0%) in control group and (87.5%) in vaccinated group as shown in Table 4. The challenge protection assay showed a considerable protective immune response of prepared S. aureus vaccine. The findings were in agreement with Giraudo et al. (1997) and Ahmad and Muhammad (2008) with significantly higher survival percentage in vaccinated group compared to that of in control group. The results of challenge protection assay suggested that vaccine is capable of eliciting protective immune response and prevent further new infections of S. aureus. Fecal shedding post challenge was also significantly reduced in the vaccinated chickens compared with those in the unvaccinated suggesting that the vaccine could be effective against S. aureus. Table 5 showed that the fecal shedding of chickens challenged with virulent S. aureus strain in group 1 vaccinated with locally prepared oil adjuvantedS. aureus vaccine was (10.8%, 8.5% and 0%) in 1st, 2n , 3r week post challenge, respectively. Shedding disappeared by the 4th week post challenge. These results agree with previous studies showed that bacterin-toxoid prevent development of new S. aureus infection probably due to increased opsonization, increased phagocytic activity of polymorphonuclear cells as a result of augmented specific IgG antibodies against S.aureus (Pellegrino et al., 2010 and Raza et al., 2015). From this study it could be concluded that the locally prepared vaccine was safe, potent and could be recommended to be used in poultry farms to prevent S. aureus infections in chicken.

DECLARATIONS

Acknowledgments

This study was supported by the Central Laboratory for Evaluation of Veterinary Biologics (CLEVB), Abbasia, Cairo and Veterinary Serum and Vaccine Research Institute (VSVRI), Abbasia, Cairo, Egypt.

Competing interests

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The authors have declared that no competing interest exists.

Authors' contribution

Abeer El-Maghraby designed the concept of the article, wrote the manuscript. SherenAzez and AbeerMwafy prepared the vaccine. AbeerMwafy revised the manuscript. All authors designed and performed the experiments and reviewed and approved the manuscript.

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