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36
Protistology 10 (1), 26-42 (2016)
Protistology
Culture collection of parasitic protists at the Zoological Institute RAS (CCPP ZIN RAS)
Marina N. Malysheva1, Maria A. Mamkaeva2, Alexei Yu. Kostygov13, Alexander O. Frolov1 and Sergey A. Karpov12
1 Zoological Institute, Russian Academy of Sciences, St. Petersburg, Russia
2 St. Petersburg State University, St. Petersburg, Russia
3 Life Science Research Centre, Faculty ofScience, University ofOstrava, Ostrava, Czech Republic
Summary
Establishment of the bank of living cultures of trypanosomatids at the Laboratory of Protozoology, Zoological Institute of the Russian Academy of Sciences, St. Petersbug, started in 1979. The first edition of the collection catalogue (Malysheva et al., 2001) included 33 strains of trypanosomatids. The present, second edition contains descriptions of 52 strains of trypanosomatids and 28 strains of aphelids and parasitic chytridiomycetes. The strains of aphelids and parasitic chytridiomycetes were isolated and initially cultivated at the Center for Culturing Collection of Microorganisms of the Research park of St. Petersburg State University. This collection is named the Culture Collection of Parasitic Protists of the Zoological Institute RAS (CCPP ZIN RAS).
Key words: Aphelididae, bibliography, culture collection, GenBank, Gromochytri-aceae, living cultures, Mesochytriaceae, parasitic protists, Trypanosomatidae
Introduction
Study of biodiversity of parasitic protists is one of the "hot spots" in modern biology. Many of these organisms cause dangerous infections of humans, animals and plants, and their genetic peculiarities are the unique examples ofevolutionary changes in eukaryotes. The establishment, support and accession of such culture collections are very important tasks for study of biodiversity, cell biology, and parasite-host interactions. A
depositarium ofparasitic protozoans was established at the Laboratory of Protozoology of the Zoological Institute RAS in 1979. The first edition of the collection catalogue was published in 2001 and included 33 strains of trypanosomatids (Malysheva et al., 2001). The present, second edition contains descriptions of 52 strains of trypanosomatids augmented with 28 strains of aphelids and parasitic chytridiomycetes. The structure of the catalogue is generally the same as in the first edition (Malysheva et al., 2001); however, it was modified in two aspects:
© 2016 The Author(s)
Protistology © 2016 Protozoological Society Affiliated with RAS
1) the deposition GenBank Numbers were included, and 2) a new section "List of the lost strains" was added.
Cultivating methods
Axenic trypanosomatid cultures have been maintained in the liquid nutrient medium BHI (Difco) with addition of hemin (25 mg/ml) and inoculated once a month. The cultures were placed in the fridge (5° C) after inoculation and subsequent incubation during three days at 25° C.
For cultivation of the Blastocrithidia flagellates, a two-phase medium has been used: the blood agar as a dense phase, and a BHI medium with the addition of serum (5-10%) as a liquid phase. For cultivation of the Trypanosoma flagellates, a slightly modified two-phase medium has been used: the blood agar as a dense phase, and a physiological solution with the addition of serum (5-10%) as a liquid phase.
Accumulating cultures of the aphelids and chytrids were maintained in culture on Tribonema gayanum Pasch. (strain 20 CALU) as the host cultivated in the mineral medium: K2HPO4 (66.7 mg/l); MgSO4 x 7H2O (33 mg/l); KNO3 (100 mg/l); microelements (1 mg/l) of stock solution: ZnSO4 x 7H2O (0.22 g/l), MgSO4 (1.81 g/l), CuSO4 X 5H2O (0.079 g/l), NaBO3 x 4H2O (2.63 mg/l), (NH4)6Mo7O2 x 4H2O (1 mg/l), FeSO4 x 7H2O (9.3 mg/l), CaCl2 (1.2 mg/l), Co(NO3)2 x H2O (0.02 mg/l), EDTA (10 mg/l), pH 7.0-7.2 (Gromov and Titova, 1991) in the 12 ml glass tubes containing 3-5 ml of the medium at room temperature in the presence of light (24 h). The inoculation was performed twice a month.
Catalogue of living cultures
Class Kinetoplastea Honigberg 1963 emend. Vickerman 1976
Subclass Metakinetoplastina Vickerman 2004 Order Trypanosomatida Kent 1880 stat. nov. Hollande 1952
Family Trypanosomatidae Doflein 1951 Genus Angomonas Souza and Corte-Real, 1991 A. deanei (Carvalho, 1973) Synonyms: Crithidia deanei Carvalho, 1973; Crithidia roitmani, Fiorini et al., 1989; Herpetomonas roitmani (Fiorini et al., 1989)
1 Strain TCC080E (=ATCC 50305) Depositor: S.A. Podlipaev History: 1990, received from E.P. Camargo, Sao Paulo University, Brazil. Isolated in Brazil.
Host: Ornidia obesa (Fabricius, 1775) (Diptera). GenBank: AF038023, AF038026, EU079130, EU095978, HM593012
Bibliography: Fiorini et al., 1989; Faria e Silva et al., 1991; Hollar et al., 1998; Yurchenko et al., 2009, Teixeira et al., 2011.
Genus Crithidia Léger, 1902 C. brevicula Frolov et Malysheva, 1989 Synonyms: Crithidia allae Frolov et Malysheva, 1989 (NBrA); Wallaceina brevicula Frolov et Malysheva, 1989 (NBr, NBrB); Wallaceina incons-tans Podlipaev, Frolov et Kolesnikov, 1990 (GK); Wallaceina vicina Malysheva et Frolov, 2004 (WG); Leptomonas peterhoffi Podlipaev, 1985 (in part) (101); Wallaceina podlipaevi Malysheva et Frolov, 2009 (101); Blastocrithidia gerricola Podlipaev, 1985 (in part) (KV1); Blastocrithidia miridarum Podlipaev et Frolov, 1987 (in part) (BM33); Leptomonas sp. (F2); Leptomonas sp. (F5); Leptomonas sp. (F6); Leptomonas sp. (F7); Leptomonas sp. (F8); Leptomonas sp. (CL8).
2 Strain NBr Depositor: A.O. Frolov
History: 1986, isolated by A.O. Frolov in the vicinity ofthe Lyady village, Pskov Province, Russia.
Host: Nabis (Nabis) brevis Scholtz, 1847 (Hete-roptera: Nabidae).
GenBank: AF153045, AF316620, AJ401357, AJ401378, EU088277- EU088279, KJ443335-KJ443337, KJ443350, KJ474892- KJ474894, KJ474931, KJ474932, Z32854,
Bibliography: Frolov and Malysheva, 1989a, 1989b; 1990; Podlipaev et al., 1991; Malysheva and Frolov, 1995; Podlipaev et al., 1998; Podlipaev and Frolov, 2000; Yurchenko et al., 2000; Merzlyak et al., 2001a, 2001b; Yurchenko et al., 2006; Yurchenko et al., 2009; Kostygov et al., 2014
3 Strain NBrB Depositor: A.O. Frolov
History: Clonal culture. 1986, isolated from the culture of C. brevicula (NBr) in the Laboratory of Protozoology ZIN RAS, St. Petersburg, Russia.
Host: Nabis (Nabis) brevis Scholtz, 1847 (Hete-roptera: Nabidae).
Bibliography: Frolov and Malysheva, 1989a, 1989b; Kolesnikov et al., 1990; Skarlato et al., 1990; Podlipaev et al., 1991; Malysheva and Frolov, 1995.
4 Strain WG
Depositor: M.N. Malysheva History: 2000, isolated by M.N. Malysheva in Komarovo, Leningrad Province, Russia.
Host: Limnoporus rufoscutellatus (Latreille,
1807) (Heteroptera: Gerridae).
GenBank: KJ443338-KJ443340, KJ443354, KJ474895-KJ474897, KJ474907-KJ474909
Bibliography: Kostygov et al., 2004; Malysheva and Frolov, 2004; Kostygov et al., 2014.
5 Strain 101
Depositor: S.A. Podlipaev History: 1980, isolated by S.A. Podlipaev in Peterhof, St. Petersburg, Russia.
Host: Nabis (Nabicula) flavomarginatus Scholtz, 1847 (Heteroptera: Nabidae).
GenBank: JN944133, AF153039, AF322390, EU088283-EU088285, KJ443308-KJ443311, KJ474867, KJ474935-KJ474937, KJ443306, KJ443307, KJ474866, KJ474933, KJ474934
Bibliography: Podlipaev, 1985; Kolesnikov et al., 1990; Marakhova et al., 1991; Podlipaev et al., 1991; Podlipaev et al., 1998; Podlipaev and Frolov, 2000; Merzlyak et al., 2001a; Kostygov et al., 2004; Yurchenko et al., 2006; Malysheva and Frolov, 2009; Yurchenko et al., 2009; Gerasimov et al., 2012a; Kostygov et al., 2014.
6 Strain KV1
Synonyms: Blastocrithidia gerricola Podlipaev, 1985 (in part).
Depositor: S.A. Podlipaev History: 1981, isolated by S.A. Podlipaev at the Curonian Spit, Kaliningrad Province, Russia.
Host: Gerris lacustris (Linnaeus, 1758) (Heteroptera).
GenBank: AF153036, AF322391, AJ401379, AY547459; KJ443332-KJ443334, KJ443351, KJ474889-KJ474891, KJ474928-KJ474930.
Bibliography: Podlipaev, 1985; Kolesnikov et al., 1990; Podlipaev et al., 1991; Podlipaev et al., 1998; Podlipaev and Frolov, 2000; Merzlyak et al., 2001a, 2001b; Podlipaev et al., 2004; Yurchenko et al., 2006; Kostygov et al., 2014.
7 Strain BM33 Depositor: A.O. Frolov
History: 1985, isolated by A.O. Frolov in the Berezitsy village, Pskov Province, Russia.
Host: Leptopterna dolobrata (Linnaeus, 1758) (Heteroptera: Miridae).
GenBank: AY547462, AY547483, KJ443312, KJ443313, KJ443355, KJ474868- KJ474870, KJ474916-KJ474918
Bibliography: Podlipaev and Frolov, 1987; Podlipaev et al., 2004; Kostygov et al., 2014.
8 Strain F2
Depositor: S.A. Podlipaev History: 1986, isolated by S.A. Podlipaev at the Cape Kartesh (White Sea), Karelia, Russia.
Host: Nabis (Nabicula) flavomarginatus Scholtz, 1847 (Heteroptera: Nabidae).
GenBank: AF375664, DQ140170, KJ443317-KJ443319, KJ443344, KJ474874-KJ474876, KJ474913-KJ474915,
Bibliography: Podlipaev and Rokitskaya, 1999; Kostygov et al., 2004; Yurchenko et al., 2006; Kostygov et al., 2014.
9 Strain F5
Depositor: S.A. Podlipaev History: 1986, isolated by S.A. Podlipaev at the Cape Kartesh (White Sea), Karelia, Russia.
Host: Nabis (Nabicula)flavomarginatus Scholtz, 1847 (Heteroptera: Nabidae).
GenBank: AY547460, KJ443320-KJ443322, KJ443345, KJ474877-KJ474879, KJ474923, KJ474924
Bibliography: Podlipaev et al., 1991; Podlipaev and Rokitskaya, 1999; Kostygov et al., 2004; Podlipaev et al., 2004; Kostygov et al., 2014.
10 Strain F7
Depositor: S.A. Podlipaev History: 1986, isolated by S.A. Podlipaev at the Cape Kartesh (White Sea), Karelia, Russia.
Host: Nabis (Nabicula)flavomarginatus Scholtz, 1847 (Heteroptera: Nabidae).
GenBank: KJ443326-KJ443328, KJ443347, KJ474883-KJ474885, KJ474910-KJ474912
Bibliography: Kostygov et al., 2004; Kostygov et al., 2014.
11 Strain CL8 Depositor: A.O. Frolov
History: 1984, isolated by A.O. Frolov in Peterhof, St. Petersburg, Russia.
Host: Nabis (Dolichonabis) limbatus Dahlbom, 1851 (Heteroptera: Nabidae).
GenBank: KJ443314-KJ443316, KJ443349, KJ474871-KJ474873, KJ474925-KJ474927
Bibliography: Podlipaev and Rokitskaya, 1999; Kostygov et al., 2004; Kostygov et al., 2014.
12 Strain GER4 Depositor: M.N. Malysheva
History: 2013, isolated by M.N. Malysheva in Komarovo, Leningrad Province, Russia.
Host: Limnoporus rufoscutellatus (Latreille, 1807) (Heteroptera: Gerridae)
C. fasciculata Léger, 1902
13 Strain Cf-C1 Depositor: S.A. Podlipaev
History: 1992, received from D. Maslov, University of California-Riverside, USA. Host: unknown.
GenBank: AF124228, AODS00000000, CFU 05816, CFU12625, CFU30216- CFU30223, D13007-D13036, EU714010, JX271578- JX271580, K03444- K03446, K03448- K03452, L18916, M19066, M19266, M20252, M22852, U05816, U30216- U30223, X03047, X04483, X04760,
Bibliography: Birkenmeyer et al., 1985; Ray et al., 1986; Feagin et al., 1988; Maslov et al., 1988; Sugisaki and Ray, 1988; Hughes et al., 1989; van der Spek et al., 1991; Campbell, Ray, 1993; Malysheva and Frolov, 1993; Sugisaki and Takanami, 1993; Maslov et al., 1994; Yasuhira and Simpson, 1995; Podlipaev et al., 1998; Engel and Ray, 1999; Podlipaev and Rokitskaya, 1999; Podlipaev and Frolov, 2000; Lye et al., 2010; Malysheva et al., 2010; Arendt, 2013.
C. guilhermei Soares et al., 1986
14 Strain Cg
Depositor: S.A. Podlipaev
History: 1990, received from E.P. Camargo, Säo Paulo University, Brazil, isolated in Rio de Janeiro, Brazil.
Host: Lucilia cuprina (Wiedemann, 1830) (Diptera: Calliphoridae).
GenBank: HQ834477
Bibliography: Soares et al., 1986; Faria e Silva, et al., 1991; Branquinha et al., 1996; Podlipaev and Rokitskaya, 1999.
Crithidia spp.
15 Strain C4
Depositor: S.A. Podlipaev
History: 1987, isolated by S.A. Podlipaev in the Nizhnesvirsky Nature Reserve, Leningrad Province, Russia.
Host: Limnoporus rufoscutellatus (Latreille, 1807) (Heteroptera: Gerridae).
GenBank: AY547463, AY547482
Bibliography: Podlipaev et al., 1998; Skarlato et al., 1998; Podlipaev and Frolov, 2000; Podlipaev et al., 2004.
16 Strain Cfm9
Depositor: A.O. Frolov
History: 1983, isolated by A.O. Frolov in Peterhof, St. Petersburg, Russia.
Host: Nabis ( Nabicula) flavomarginatus Scholtz, 1847 (Heteroptera: Nabidae).
GenBank: AF153041, AF320820, AY547465, AY547491
Bibliography: Merzlyak et al., 2001a; Podlipaev et al., 2004, Yurchenko et al., 2006.
17 Strain CL6 Depositor: A.O. Frolov
History: 1983, isolated by A.O. Frolov in the Berezitsy village, Pskov Province, Russia.
Host: Nabis ( Nabicula) limbatus Dahlbom, 1851. Bibliography: Podlipaev and Rokitskaya, 1999.
Genus Leptomonas Kent, 1880 Leptomonaspyrrhocoris (Zotta, 1912)
18 Strain LP
Depositor: M.N. Malysheva History: Isolated by M.N. Malysheva, Krasnodar Region, Russia.
Host: Pyrrhocoris apterus Linnaeus, 1758 (Hete-roptera: Pyrrhocoridae).
GenBank: AY029072, DQ140169 Bibliography: Yurchenko et al., 2006; Votypka et al., 2012.
19 Strain K1
Depositor: S.A. Podlipaev History: 2004, isolated by S.A. Podlipaev in Burkina Faso, West Africa.
Host: Dysdercus sp. (Heteroptera: Pyrrhoco-ridae).
20 Strain D1
Depositor: S.A. Podlipaev History: 2004, isolated by S.A. Podlipaev in Burkina Faso, West Africa.
Host: Dysdercus sp. (Heteroptera: Pyrrhoco-ridae).
21 Strain PP1
Depositors: A.O. Frolov, M.N. Malysheva History: 2014, isolated in Pskov Province, Russia.
Host: Pyrrhocoris apterus Linnaeus, 1758 (Hete-roptera: Pyrrhocoridae).
Bibliography: Frolov et al., 2014.
22 Strain PP2
Depositors: A.O. Frolov, M.N. Malysheva History: 2014, isolated in Pskov Province, Russia.
Host: Pyrrhocoris apterus Linnaeus, 1758 (Hete-roptera: Pyrrhocoridae).
Bibliography: Frolov et al., 2014.
23 Strain PP3
Depositors: A.O. Frolov, M.N. Malysheva History: 2014, isolated in Pskov Province, Russia.
Host: Pyrrhocoris apterus Linnaeus, 1758 (Hete-roptera: Pyrrhocoridae).
Bibliography: Frolov et al., 2014.
24 Strain PP1 cl 10 Depositor: M.N. Malysheva
History: Clonal culture. 2014, isolated from the culture of L. pyrrhocoris (Strain PP1) in the Laboratory of Protozoology ZIN RAS, St. Petersburg, Russia.
25 Strain PP1 cl 11 Depositor: M.N. Malysheva
History: Clonal culture. 2014, isolated from the culture of L. pyrrhocoris (Strain PP1) in the Laboratory of Protozoology ZIN RAS, St. Petersburg, Russia.
26 Strain PP2 cl 2 Depositor: M.N. Malysheva
History: Clonal culture. 2014, isolated from the culture of L. pyrrhocoris (Strain PP2) in the Laboratory of Protozoology ZIN RAS, St. Petersburg, Russia.
27 Strain PP2 cl. 3 Depositor: M.N. Malysheva
History: Clonal culture. 2014, isolated from the culture of L. pyrrhocoris (Strain PP2) in the Laboratory of Protozoology ZIN RAS, St. Petersburg, Russia.
28 Strain PP3 cl. 4 Depositor: M.N. Malysheva
History: Clonal culture. 2014, isolated from the culture of L. pyrrhocoris (Strain PP3) in the Laboratory of Protozoology ZIN RAS, St. Petersburg, Russia.
29 Strain PP3 cl. 5 Depositor: M.N. Malysheva
History: Clonal culture. 2014, isolated from the culture of L. pyrrhocoris (Strain PP3) in the Laboratory of Protozoology ZIN RAS, St. Petersburg, Russia.
30 Strain PP3 cl. 6 Depositor: M.N. Malysheva
History: Clonal culture. 2014, isolated from the culture of L. pyrrhocoris (Strain PP3) in the Laboratory of Protozoology ZIN RAS, St. Petersburg, Russia.
31 Strain 25EC Depositor: S.A. Podlipaev
History: 2003, received from D. Maslov, University of California-Riverside, USA. 2003, isolated by D. Maslov, El Ceibo, Costa Rica.
Host: nymph Dysdercus sp. (Heteroptera: Pyr-rhocoridae).
GenBank: JF937081 Bibliography: Votypka et al., 2012.
32 Strain 27EC Depositor: S.A. Podlipaev
History: 2003, received from D. Maslov, University of California-Riverside, USA. 2003, isolated by D. Maslov, El Ceibo, Costa Rica.
Host: nymph Dysdercus sp. (Heteroptera: Pyrrhocoridae).
33 Strain 28EC Depositor: S.A. Podlipaev
History: 2003, received from D. Maslov, University of California-Riverside, USA. 2003, isolated by D. Maslov, El Ceibo, Costa Rica.
Host: nymph Dysdercus sp. (Heteroptera: Pyr-rhocoridae).
GenBank: JF937082-JF937084 Bibliography: Votypka et al., 2012.
34 Strain 29EC Depositor: S.A. Podlipaev
History: 2003, received from D. Maslov, University of California-Riverside, USA. 2003, isolated by D. Maslov, El Ceibo, Costa Rica.
Host: undetermined nymph Pyrrhocoridae (Heteroptera).
35 Strain 30EC Depositor: S.A. Podlipaev
History: 2003, received from D. Maslov, University of California-Riverside, USA. 2003, isolated by D. Maslov, El Ceibo, Costa Rica.
Host: nymph Dysdercus sp. (Heteroptera: Pyr-rhocoridae).
36 Strain 31EC Depositor: S.A. Podlipaev
History: 2003, received from D. Maslov, University of California-Riverside, USA. 2003, isolated by D. Maslov, El Ceibo, Costa Rica.
Host: nymph Dysdercus sp. (Heteroptera: Pyr-rhocoridae).
37 Strain 32EC Depositor: S.A. Podlipaev
History: 2003, received from D. Maslov, University of California-Riverside, USA. 2003, isolated by D. Maslov, El Ceibo, Costa Rica.
Host: nymph Dysdercus sp. (Heteroptera: Pyr-rhocoridae).
38 Strain 12VL Depositor: S.A. Podlipaev
History: 2003, received from D. Maslov, University of California-Riverside, USA. 2003, isolated by D. Maslov, Carrara, Costa Rica.
Host: Dysdercus obliquus (Heteroptera: Pyrrho-coridae).
GenBank: JF937077
Bibliography: Votypka et al., 2012.
Leptomonas podlipaevi Yurchenko, Lukes, Xu, Maslov, 2006
39 Strain UCR5
Depositor: S.A. Podlipaev
History: 2003, received from D. Maslov, University of California-Riverside, USA. 2002, isolated by D. Maslov, California, USA.
Host: Boisea rubrolineata (Barber, 1956) (Hete-roptera: Rhopalidae).
GenBank: DQ019000; DQ140174, DQ140175, DQ383649
Bibliography: Yurchenko et al., 2006.
L. seymouri Wallace, 1977
40 Strain ATCC 30220
Depositor: S.A. Podlipaev
History: 1992, received from D. Maslov, University of California-Riverside, USA. 1959, isolated by F.G. Wallace, Florida, USA.
Host: Dysdercus suturellus (Herrich-Schaeffer, 1842) (Heteroptera: Pyrrhocoridae).
GenBank: AF047495, AF053738, AF153040, AF338253, AH015821, AJ243569, AJ245951, AJ313532, AJ318494-AJ318497, AJ401380, AJ511865, AY160127, AY160128, AY547477, DQ239758, DQ239760, DQ239761, EF421167-EF421174, EU623433, GQ153669-GQ153671, JN944129, S78663, U23406, X07487, X07488, X07716, X14005, X78552, X82217
Bibliography: Wallace, 1977; Camargo et al., 1978 a, 1978b; Galinari and Camargo, 1978; Goncalves de Lima et al., 1979; Fish et al., 1981; Freymuller and Camargo, 1981; Alfieri and Camargo, 1982; Camargo et al., 1982; Dollahon et al., 1983; Kim and Ray, 1985; Bellofatto et al., 1988; Bellofatto and Cross, 1988; Conchon et al., 1989; Teixeira and Camargo, 1989; Gazzinelli et al., 1991; Palfi et al., 1994; Xu et al., 1994; Hartree and Bellofatto, 1995; He and Bellofatto, 1995; Teixeira et al., 1995; Branquinha et al., 1996; Hannaert et al., 1998; Bell and Bindereif, 1999; Podlipaev and Rokitskaya, 1999; Bell et al., 2000; Gilinger and Bellofatto, 2001; Merzlyak et al., 2001a,b; Podlipaev et al., 2004; Bessolitsina et al., 2005; Das and Bellofatto, 2005; Flegontov et al., 2006a,b; Nasereddin et al., 2008, Jackson, 2010; Gerasimov et al., 2012a.
Leptomonas spp.
41 Strain LS
Depositor: S.A. Podlipaev
History: 1992, received from D. Maslov,
University of California-Riverside, USA, isolated in USA.
Host: unknown.
GenBank: J03814, L19409, X53914 Bibliography: Lake et al., 1988; Fernandes et al., 1993; Podlipaev and Rokitskaya, 1999.
42 Strain 24EC Depositor: S.A. Podlipaev
History: 2003, received from D. Maslov, University of California-Riverside, USA. 2003, isolated by D. Maslov, El Ceibo, Costa Rica.
Host: undetermined nymph of Pyrrhocoridae (Heteroptera).
Genus Blastocrithidia Laird, 1959 Blastocrithidia sp.
43 Strain BLP Depositor: M.N. Malysheva
History: 2015, isolated in Pskov Province, Russia.
Host: Pyrrhocoris apterus Linnaeus, 1758 (Hete-roptera: Pyrrhocoridae). Remark: non-axenic.
Genus Herpetomonas Kent, 1880
H. muscarum (Leidy, 1856)
Synonym: H. megaseliae Dagget et al. 1972
44 Strain: ATCC 30260 Depositor: S.A. Podlipaev
History: 1992, received from D. Maslov, University ofCalifornia-Riverside, USA. 1968, isolated by F.G. Wallace in Minneapolis, Minnesota, USA.
Host: Musca domestica Linnaeus, 1758 (Diptera: Muscidae).
GenBank: AY547484, AUXJ00000000, AY 547484, DQ092548, EU095983, EU095984, FJ807255, JF756655, JN944119, JQ359731, JQ359748, JQ406959- JQ406961, KC503350-KC503410, KF160206-KF160242, KP689382, KP689382, KP689391, KP689399, L10849, L10850, L18872, U01007, U01011, U01015, U05812
Bibliography: Rogers and Wallace, 1971; Galinari and Camargo, 1978; Yoshida, 1978; Fish et al., 1981; Freymuller and Camargo, 1981; Coombs et al., 1982; Alfieri and Camargo, 1982; Van der Ploeg et al., 1984; Teixeira and Camargo, 1989; Faria e Silva et al., 1991; Landweber and Gilbert, 1993; Maslov et al., 1994; Lopes et al., 1997; Redman and Coombs, 1997; Podlipaev et al., 1998; Podlipaev and Rokitskaya, 1999; Podlipaev and Frolov, 2000; Podlipaev et al., 2004; Yurchenko et al., 2006; Gile et al., 2009; Yurchenko et al., 2009; Rocha et al.,
2010; Alves et al., 2011; Gerasimov et al., 2012a; Alves et al., 2013; Borghesan et al., 2013; Klein et al., 2013.
H. samuelpessoai (Galvao et al., 1970).
Synonyms: Leptomonas pessoai Galvao et al., 1970, H. pessoai sensu Levine, 1978.
45 Strain: ATCC 30252
Depositor: S.A. Podlipaev
History: 1992, received from D. Maslov, University of California-Riverside, USA, isolated in Brazil.
Host: Zelus leucogrammus (Perty, 1833) (Heteroptera: Reduviidae).
GenBank: AF047494, AF064359-AF064399, AJ401381, AJ493125, FJ807256, JN944120, JQ359716, JQ359743, JQ406989-JQ406991, L10851, L10852, L38605, U01008, U01012, U01016, X62331
Bibliography: Galvao et al., 1970; Roitman et al., 1972; Roitman and Roitman, 1972; Camargo et al., 1978; Galinari and Camargo, 1978; Yoshida, 1978; Goncalves de Lima et al., 1979; Fish et al., 1981; Freymuller and Camargo, 1981; Alfieri and Camargo, 1982; Fish et al., 1982; Pinto et al., 1982; Kim and Ray, 1985; Palatnik et al., 1987; Jansen et al., 1988; Conchon et al., 1989; Teixeira and Camargo, 1989; Faria e Silva et al., 1991; Aksoy, 1992; Gazzinelli et al., 1992; Hupperich et al., 1992; Landweber and Gilbert, 1993; Landweber and Gilbert, 1994; Hannaert et al., 1998; Podlipaev et al., 1998; Fu et al., 1999; Podlipaev and Rokitskaya, 1999; Podlipaev and Frolov, 2000; Merzlyak et al., 2001; Gile et al, 2009; Gerasimov et al., 2012a; Borghesan et al., 2013.
H. nabiculae (Podlipaev 1985)
Synonyms: Leptomonas nabiculae Podlipaev 1985, L. peterhoffi Podlipaev 1985, L. occidentalis Podlipaev 1985, Leptomonas sp. Nfm.
46 Strain Nfm2
Depositor: A.O. Frolov
History: 1991, isolated by A.O. Frolov in Bere-zitsy village, Pskov Province, Russia.
Host: Nabis (Nabicula)flavomarginatus Scholtz, 1847 (Heteroptera: Nabidae).
GenBank: JN624300
Bibliography: Podlipaev et al., 1998; Podlipaev and Frolov, 2000; Merzlyak et al., 2001a; Podlipaev et al., 2004; Kostygov et al., 2011.
Genus Wallacemonas Kostygov et Yurchenko, 2014
W. collosoma (Wallace, Clark, Dyer et Collins, 1960)
Synonym: Leptomonas collosoma Wallace, Clark, Dyer et Collins, 1960.
47 Strain: ATCC 30261
Depositor: S.A. Podlipaev
History: 1992, received from D. Maslov, University ofCalifornia-Riverside, USA. 1960, isolated by F.G. Wallace in Minneapolis, Minnesota, USA.
Host: Limnoporus dissortis (Drake and Harris, 1930) (Heteroptera: Gerridae).
GenBank: AF006632, AF006750, AF050095, AF126283, AF153038, AF204671, AF331656, AF351198, AH015822, AY046598, AY145448, AY495451, AY495452, AY594669, DQ239762-DQ239765, EU084898, EU084899, HG323624, JF946515, JN582046, JN944123, K02633, L32919, S76723, X56453-X56455, X79014
Bibliography: Wallace et al., 1960; Camargo et al., 1978a,b; Galinari and Camargo, 1978; Fish et al., 1981; Freymuller and Camargo, 1981; Alfieri and Camargo, 1982; Camargo et al., 1982; Dollahon et al., 1983; Conchon et al., 1989; Teixeira et al, 1989; Gazzinelli et al., 1991; Ben-Shlomo et al., 1997; Xu et al., 1997; Levitan et al., 1998; Podlipaev et al., 1998; Goncharov et al., 1999; Podlipaev and Rokitskaya, 1999; Li et al., 2000; Podlipaev and Frolov, 2000; Liang et al., 2001; Merzlyak et al., 2001a; Liu et al., 2003; Liang et al., 2004; Yurchenko et al., 2009; Gerasimov et al., 2012a,b; Kostygov et al., 2014.
W. rigidus (Podlipaev, Malysheva et Kolesnikov, 1991)
Synonyms: Leptomonas rigidus, Leptomonas sp. PL11, Leptomonas sp. Sld
48 Strain PL11
Depositor: S.A. Podlipaev
History: 2001, isolated by P. Merkulov and E. Slisarenko at the Cape Kartesh (White Sea), Karelia, Russia.
Host: Salda littoralis (Linnaeus, 1758) (Heteroptera: Saldidae).
GenBank: JN582047, JN944127, JN944128
Bibliography: Kostygov et al., 2004; Podlipaev et al., 2004, Gerasimov et al., 2012b.
49 Strain Sld
Depositor: S.A. Podlipaev
History: 2000, isolated by S.A. Podlipaev at the Cape Kartesh (White Sea), Karelia, Russia.
Host: Saldula pallipes (Fabricius, 1794) (Heteroptera: Saldidae).
GenBank: JF946516, JN582048 Bibliography: Kostygov et al., 2004; Podlipaev et al., 2004, Gerasimov et al., 2012a, 2012b.
Wallacemonas sp.
50 Strain Wsd Depositor: S.A. Podlipaev
History: 2001, isolated by P. Merkulov and E. Slisarenko at the Cape Kartesh (White Sea), Karelia, Russia.
Host: Salda littoralis (Linnaeus, 1758 ) (Hete-roptera: Saldidae).
GenBank: AY547488, JF946514, JF946517, JN582045, JN944131, JN944132, JN944134, JN944135
Bibliography: Kostygov et al., 2004; Podlipaev et al., 2004, Gerasimov et al., 2012a, 2012b.
51 Strain TrypX Depositor: S.A. Podlipaev
History: 1997, received from J. Lukes, Institute of Parasitology, Czech Republic. 1983, isolated in Alexandria, Egypt.
Host: Rattus norvegicus (Berkenhout, 1769) (Rodentia: Muridae).
Bibliography: Morsy et al., 1988; Podlipaev et al., 1998; Podlipaev and Frolov, 2000; Podlipaev et al., 2004.
Genus Trypanosoma Gruby, 1843 Trypanosoma sp.
52 Strain TPE Depositor: M.N. Malysheva
History: 2015, isolated by M.N. Malysheva in Pskov Province, Russia.
Host: Pelophylax esculetus (Linnaeus, 1758). Remark: non-axenic.
Superphylum Opisthosporidia Phylum Aphelida Class Aphelidea
Order Aphelidida Gromov, 2000 Family Aphelididae Gromov, 2000 Genus Aphelidium Zopf, 1885 Aphelidium aff. melosirae
53 Strain X-101 Depositor: M.A. Mamkaeva
History: 2012, isolated by M.A. Mamkaeva in the vicinity of Sergievka park, Peterhof, St. Petersburg, Russia. Sample P-1. Host: Tribonema gayanum Pash. GenBank: KJ566931 Bibliography: Karpov et al. 2014.
54 Strain X-102 Depositor: M.A. Mamkaeva
History: 2012, isolated by M.A. Mamkaeva in the vicinity of the Kuty village, Kingisepp District, Leningrad Province, Russia. Sample P-2. Host: Tribonema gayanum Pash.
Aphelidida spp.
55 Strain X-103 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva in the vicinity of the Zaborka village, Novgorod Province, Russia. Sample 19.
Host: Tribonema gayanum Pash.
56 Strain X-104 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva in the vicinity of the Kurakino village, Novgorod Province, Russia. Sample 21.
Host: Tribonema gayanum Pash.
57 Strain X-105 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva in the vicinity of the Kurakino village, Novgorod Province, Russia. Sample 23.
Host: Tribonema gayanum Pash.
58 Strain X-106 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva in the vicinity of Peterhof, St. Petersburg, Russia. Sample 24.
Host: Tribonema gayanum Pash.
59 Strain X-107 Depositor: M.A. Mamkaeva
History: 2015, isolated by M.A. Mamkaeva in the vicinity of the Okulovka town, Novgorod Province, Russia. Sample K-4. Host: Tribonema gayanum Pash.
60 Strain X-108 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva from a roadside ditch in the vicinity ofthe Krestzy village, Novgorod Province, Russia. Sample A-1. Host: Tribonema gayanum Pash.
61 Strain X-109 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva from a roadside ditch in the vicinity ofthe Krestzy village, Novgorod Province, Russia. Sample A-2. Host: Tribonema gayanum Pash.
62 Strain X-110 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva from the pond of Krestzy village, Novgorod Province, Russia. Sample A-3.
Host: Tribonema gayanum Pash.
63 Strain X-111 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva from a roadside ditch in the vicinity of the Zaytzevo village, Novgorod Province, Russia. No spesimen: A-6.
Host: Tribonema gayanum Pash.
64 Strain X-112 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva in the vicinity ofVyborg, Leningrad Province, Russia. Sample V-1.
Host: Tribonema gayanum Pash.
Class Chytridiomycetes Genus " Amoeboradix" "Amoeboradix" sp.
65 Strain X-113 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva from a roadside ditch in the vicinity of Sergievka park, Peterhof, St. Petersburg, Russia. Sample K-1. Host: Tribonema gayanum Pash.
66 Strain X-114 Depositor: M.A. Mamkaeva
History: Isolated in the vicinity of the Opolie village, Kingisepp District, Leningrad Province, Russia. Sample K-2.
Host: Tribonema gayanum Pash.
Genus Polyphagus Nowak. P. parasiticus Nowak.
67 Strain X-115 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva from a roadside ditch in the vicinity ofthe Zaborka village, Novgorod Province, Russia. Sample P.p. Host: Tribonema gayanum Pash.
68 Strain X-116 Depositor: M.A. Mamkaeva
History: 2015, isolated by M.A. Mamkaeva in the vicinity of the Zaytzevo village, Novgorod Province, Russia. Sample P-6. Host: Tribonema gayanum Pash.
Genus Chytridium Braun Chytridium sp.
69 Strain X-117
Depositor: M.A. Mamkaeva History: 2015, isolated by M.A. Mamkaeva in the vicinity of the Hartchevnia village, Novgorod Province, Russia. Sample H-1. Host: Tribonema gayanum Pash.
70 Strain X-118 Depositor: M.A. Mamkaeva
History: isolated by M.A. Mamkaeva from a roadside ditch road, Leningrad Province, Russia. Sample CH-4.
Host: Tribonema gayanum Pash.
71 Strain X-119 Depositor: M.A. Mamkaeva
History: 2015, isolated by M.A. Mamkaeva in the vicinity of the Zaytzevo village, Novgorod Province, Russia. Sample CH-6. Host: Tribonema gayanum Pash.
Genus Rhizophydium Schenk Rhizophydium sp.
72 Strain X-120 Depositor: M.A. Mamkaeva
History: 2015, isolated by M.A. Mamkaeva in the vicinity of the Tregubovo village, Novgorod Province, Russia. Sample H-3 Host: Tribonema gayanum Pash.
73 Strain X-121 Depositor: M.A. Mamkaeva
History: 2015, isolated by M.A. Mamkaeva in the Kuty village, Kingisepp District, Leningrad Province, Russia. Sample KU-1. Host: Tribonema gayanum Pash.
74 Strain X-122 Depositor: M.A. Mamkaeva
History: 2015, isolated by M.A. Mamkaeva in the Kuty village, Kingisepp District, Leningrad Province, Russia. Sample KU-2. Host: Tribonema gayanum Pash.
Order Mesochytriales Karpov et Aleoshin, 2014 Family Mesochytriaceae Karpov et Aleoshin, 2014
Genus Mesochytrium Gromov et al. 2000 Mesochytrium sp.
75 Strain X-123 Depositor: M.A. Mamkaeva
History: 2012, isolated by M.A. Mamkaeva in the vicinity ofStary Peterhof, St. Petersburg, Russia. Sample 10.
Host: Tribonema gayanum Pash. GenBank: FJ804149, FJ804153 Bibliography: Karpov et al. 2010.
Order Gromochytriales Karpov et Aleoshin, 2014
Family Gromochytriaceae Karpov et Aleoshin, 2014
Genus Gromochytrium Karpov et Aleoshin, 2014 Gromochytrium sp.
76 Strain X-124 Depositor: M.A. Mamkaeva
History: 2012, isolated by M.A. Mamkaeva in the Kuty village, Kingisepp District, Leningrad Province, Russia. Sample X-22. Host: Tribonema gayanum Pash.
77 Strain X-125 Depositor: M.A. Mamkaeva
History: 2013, isolated by M.A. Mamkaeva in the Zaborka village, Novgorod Province, Russia. Sample V-1.
Host: Tribonema gayanum Pash.
Class Monoblepharidomycetes
78 Strain X-126 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva in the vicinity of Kotka, Finland. Sample F-1. Host: Tribonema gayanum Pash.
79 Strain X-127 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva from a roadside ditch in the vicinity ofthe Zaborka village, Novgorod Province, Russia. Sample PP1. Host: Tribonema gayanum Pash.
80 Strain X-128 Depositor: M.A. Mamkaeva
History: 2014, isolated by M.A. Mamkaeva from a pond in the Zaytzevo village, Novgorod Province, Russia. Sample R.m.
Host: Tribonema gayanum Pash.
List of lost cultures
Genus Crithidia Léger, 1902 C. brevicula Frolov et Malysheva, 1989 1 Strain NBrA Depositor: A.O. Frolov
History: Isolated from culture C. brevicula (NBr) in the Laboratory of Protozoology ZIN RAS, St. Petersburg, Russia.
Host: Nabis (Nabis) brevis (Scholtz, 1847) (He-teroptera).
Bibliography: Frolov and Malysheva, 1989a, 1990; Kolesnikov et al., 1990; Marakhova et al., 1991; Podlipaev et al., 1991.
2 Strain ZK Depositor: A.O. Frolov
History: 1986, isolated by A.O. Frolov in the village Berezitsy, Pskov Province, Russia.
Host: Grypocoris sexguttatus (Fabricius, 1777) (Heteroptera: Miridae).
GenBank: AF121798, AF124056, AF153044, AJ401356, AJ401382, EU076608, EU088280-EU088282, KJ443341-KJ443343, KJ443353, KJ474898-KJ474900, KJ474904-KJ474906
Bibliography: Podlipaev and Frolov, 1987; Frolov and Skarlato, 1990; Kolesnikov et al., 1990; Podlipaev et al., 1990; Marakhova et al, 1991; Podlipaev et al., 1991; Marakhova et al, 1993; Podlipaev et al., 1998; Podlipaev and Rokitskaya, 1999; Podlipaev and Frolov, 2000; Yurchenko et al., 2000; Merzlyak et al., 2001a, 2001b; Yurchenko et al., 2009; Kostygov et al., 2014.
3 Strain F6
Depositor: S.A. Podlipaev History: 1986, isolated by S.A. Podlipaev at the Cape Kartesh (White Sea), Karelia, Russia.
Host: Nabis ( Nabicula) flavomarginatus Scholtz, 1847 (Heteroptera: Nabidae).
GenBank: AF153042, AY029073, AY547461, AY547478, KJ443323-KJ443325, KJ443346, KJ474880-KJ474882, KJ474901-KJ474903
Bibliography: Kolesnikov et al., 1990; Podlipaev et al., 1991; Merzlyak et al., 2001a; Kostygov et al., 2004; Podlipaev et al., 2004; Kostygov et al., 2014.
4 Strain F8
Depositor: S.A. Podlipaev History: 1986, isolated by S.A. Podlipaev at the Cape Kartesh (White Sea), Karelia, Russia.
Host: Nabis ( Nabicula) flavomarginatus Scholtz, 1847 (Heteroptera: Nabidae).
GenBank: KJ443329-KJ443331, KJ443348, KJ474886-KJ474888, KJ474919-KJ474922
Bibliography: Podlipaev and Rokitskaya, 1999; Kostygov et al., 2004; Kostygov et al., 2014.
C. dedva Kostygov et al., 2011
5 Strain D2
Depositor: S.A. Podlipaev History: 1982, isolated by S.A. Podlipaev in the village Beloostrov, Leningrad Province, Russia.
Host: Nabis (Nabicula) flavomarginatus Scholtz, 1847 (Heteroptera). GenBank: JN624299
Bibliography: Podlipaev, 1985; Kolesnikov et al., 1990; Podlipaev et al., 1991; Podlipaev et al., 1998; Kostygov et al., 2004, Kostygov et al., 2011.
Crithidia sp.
6 Strain P
Depositor: S.A. Podlipaev
History: 1988, isolated by S.A. Podlipaev in the village Beloostrov, Leningrad Province, Russia.
Host: Panorpa communis Linnaeus, 1758 (Me-coptera).
Bibliography : Podlipaev et al., 1998; Bulat et al., 1999; Podlipaev and Rokitskaya, 1999; Podlipaev and Frolov, 2000; Kostygov et al., 2004; Podlipaev et al., 2004.
Genus Wallacemonas Kostygov et Yurchenko, 2014
W. rigidus (Podlipaev, Malysheva et Kolesnikov, 1991)
Synonyms: Leptomonas rigidus Podlipaev, Malysheva et Kolesnikov, 1991; Wallaceina rigida.
7 Strain 1b
Depositor: S.A. Podlipaev
History: 1987, isolated by S.A. Podlipaev at the Cape Kartesh (White Sea), Karelia, Russia.
Host: Salda littoralis (Linnaeus, 1758) (Heteroptera).
GenBank: JN582049
Bibliography: Podlipaev et al., 1991, Kolesnikov et al., 1990.
Acknowledgements
Support for this work was provided by RFBR grant No. 15-29-02734. The strains were isolated and initially cultivated at the Center for Culturing Collection of Microorganisms of the Research park of St. Petersburg State University.
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