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30Journal of Siberian Federal University. Biology 2018 11(2): 146-156
УДК 57.017.6:576.316.24
Modulation of the Process of Aging in Human Organism: Recent Advances in Biomarkers for Diagnosis and Treatment
Dimitrios Tsoukalasa,b, Persefoni Fragkiadakia, Evangelia Sarandia,b and Aristidis Tsatsakis*a
aUniversity of Crete
Voutes University Campus, Heraklion, Crete, GR-70013, Greece bHealth Clinics for Autoimmune & Chronic Diseases 5 Koumpari Str., Athens, 10674, Greece
Received 11.02.2018, received in revised form 02.04.2018, accepted 19.05.2018
Aging is a complex biological process. Main factors that interplay in the aging process include free radicals and oxidation, insulin and insulin growth factors, sirtuins, mTOR, microbiome, lack of micronutrients, and declining proteasome activity which lead to cellular damage. Damaged cells are being replaced by somatic stem cells which proliferate to generate new cells. For each cell replication the telomeres of the related stem cells become shorter and this is the basic factor that modulates aging. Telomere length shortens with age and leads to senescence. Shorter telomeres are associated with increased incidence of aging related diseases and shorter lifespan. The percentage of short telomeres and rate of telomere shortening predicts longevity in mammals. Measurement of single telomeres through Q-FISH is the only reliable method to evaluate single telomere length and percentage of short telomeres. Repeated measurements at a distance of 6 months or a year can reveal the rate of change of the short telomeres, and response ofpatients to treatments, lifestyle, diet, supplementation and exercise modifications. A natural product telomerase activator TA-65, an astragalus extract, has been found to lengthen telomere in humans. By experimenting with different combinations of cycloastragenol (astragalus extract active molecule) we've able to increase telomerase activation in relation to the control cells.
Keywords: aging, telomeres, telomere length, telomerase.
Citation: Tsoukalas D., Fragkiadaki P., Sarandi E., Tsatsakis A. Modulation of the process of aging in human organism: recent advances in biomarkers for diagnosis and treatment. J. Sib. Fed. Univ. Biol., 2018, 11(2), 146-156. DOI: 10.17516/1997-13890057.
© Siberian Federal University. All rights reserved Corresponding author E-mail address: [email protected]
*
Модулирование процесса старения в организме человека: последние достижения в области биомаркеров для диагностики и лечения
Д. Цукаласаб, П. Фрагкиадакиа, Е. Сарандиаб, А. Тсатсакиса
Университет Крита
Греция, GR-70013, Крит, Ираклион, Университетский кампус Воутес бКлиника здоровья для аутоиммунных и хронических заболеваний
Греция, 10674, Афины, ул. Коумпари, 5
Старение - это сложный биологический процесс. Основные факторы, участвующие в процессе старения и приводящие к повреждению клеток, включают свободные радикалы, процессы окисления инсулина, инсулиноподобные факторы роста, сиртуины, mTOR, микробиом, отсутствие микроэлементов и снижение активности протеасом. Поврежденные клетки заменяются соматическими стволовыми клетками, которые размножаются, генерируя новые клетки. При каждой клеточной репликации теломеры родственных стволовых клеток становятся короче, и это основной фактор, который модулирует старение. Длина теломер сокращается с возрастом и приводит к старению. Более короткие теломеры ассоциируются с увеличением заболеваний, связанных со старением и сокращением продолжительности жизни. Данные о процентном содержании коротких теломер и скорости сокращения теломер позволяют предсказать продолжительность жизни млекопитающих. Измерение отдельных теломер с помощью Q-FISH является единственным надежным методом оценки длины теломеры и доли коротких теломер. Повторные измерения через 6 месяцев или год могут выявить скорость изменения длины коротких теломер и реакцию пациентов на лечение, изменение образа жизни, диеты, пищевых добавок и физической активности. Было обнаружено, что натуральный продукт - активатор теломеразы ТА-65, экстракт астрагала, удлиняет теломеры людей. Экспериментируя с различными комбинациями циклоастрагенола (активная молекула экстракта астрагала), мы смогли достичь активации теломеразы по сравнению с контрольными клетками.
Ключевые слова: старение, теломера, длина теломеры, теломераза.
Introduction
Aging is a process characterized by progressive decline of organ functions, increased incidence of age-related diseases and mortality (Cui et al., 2012; Romano et al., 2010). Although diseases associated with aging are mistakenly referred as diseases of the elderly, they are
markedly distinct. Age-related diseases include cardiovascular disease (CAD, stroke), cancer, arthritis, osteoporosis, cataracts, diabetes, type 2, hypertension, chronic obstructive pulmonary disease and dementia (WHO, 2011). Epidemiological data show that they are responsible for 2/3 of the global death burden,
while they account for 90% of disease in the industrialized world. Roughly 150.000 people die every day and 100.000 of them die due to age-associated causes, making aging the greatest risk factor for death and disease. Non-communicable diseases (NCD) are the most common health problem in older age and their incidence is closely related to wealth. Heart disease, stroke, and chronic lung disease are the biggest killers of older people worldwide, though in low-income countries older people carry a greater disease burden than those in the rich world (Prince et al., 2015). Previous studies have described telomere length as promising emerging biomarker for use in colorectal cancer which is placed in the third place among the most diagnosed cancer in men (Nikolouzakis et al., 2018). Age-related diseases cause disability through sensory impairments, back and neck pain, chronic obstructive pulmonary disease, depression, falls, diabetes, Alzheimer disease, and osteoarthritis (Frasca et al., 2017). Previous studies have summarized the current state of knowledge on the role of telomeres in mental disorders with the most common being depression, schizophrenia and stress-anxiety. Most studies report reduced telomere length in patients suffering from mental disorders, compared to the general population. Since the factors that can affect telomere length are various, more experiments and investigations are required to understand the general impact of different factors on telomere length (Vakonaki et al., 2018).
The term aging refers to the increase of biological age and not the chronological. There is only a weak association between biological age with a person's age in years. Indeed, some 80-year-olds have physical and mental capacities similar to 20 years-old individuals. Also, health in older age is not random. Although some of the differences in older people's health reflect their genetic inheritance, most are due to epigenetic
factors, their physical and social environments. It's important to note that epigenetic factors start to influence aging since childhood (Benayoun et al., 2015).
Aging is a multifactorial process
Several factors have been suggested to interplay in aging, including free radicals and oxidation, mitochondrial dysfunction, insulin and insulin growth factors, sirtuins, mTOR, microbiome, lack of micronutrients and declining proteasome activity (Fig. 1). The biological significance and their role in the process of aging will be further discussed.
Free radicals and oxidation have been long suggested to be the leading cause of aging, while another theory indicates mitochondrial dysfunction as the key player (Romano et al., 2010). Oxidative stress reflects the imbalance between the production of reactive oxygen species (ROS) and the antioxidant defenses. The free radical theory stated that oxidative stress causes damage to cell components - proteins, lipids, and DNA through the release of excessive free radicals (Betteridge, 2000).
Mitochondrial dysfunction theory of aging is a modification of the free radical theory, and suggests that cumulative damage to the mitochondria and their DNA (mtDNA) caused by free radicals is the central factor of aging (Payne & Chinnery, 2015).
Insulin and insulin growth factor-I (IGF-I) reduced signaling predict increased longevity in organisms ranging from yeast to mammals (Parrella et al., 2015; Milman et al., 2014). Disruptions of the circadian rhythm, the natural feeding and the fasting cycle facilitates increased calorie intake and contribute to metabolic diseases that may accelerate the aging process. Alternating periods of feeding with periods of fasting, as in time restricted feeding, fast mimicking diets and periodic or intermittent
Fig. 1. Factors affecting aging. The multifactorial process of aging is affected by free radicals and oxidation, mammalian target of rapamycin (mTOR), sirtuins, dysfunction of mitochondria, lack of micronutrients, insulin and insulin growth factor (IGF), decline of the proteasome activity and the microbiome
fasting, impart pleiotropic benefits have been associated with the down regulation of IGF-1 and improvement of insulin sensitivity (Lee et al., 2014). Metformin protective effects against several age-related diseases in humans have been associated with decreased insulin resistance and IGF-1 signaling. Those effects will be tested in the TAME (Targeting Aging with Metformin) trial. Insulin and IGF-1 are also central regulating factors for the SIRT-1 (sirtuin) and mTOR pathways (Watroba & Szukiewicz, 2016; Barzilai et al., 2016).
Sirtuins are a class of nicotinamide adenine dinucleotide (NAD+)-dependent deacetylases, and have been suggested to be potent in prevention of aging and age-related diseases, and even reverse aspects of aging (Bonkowski & Sinclair, 2016). Sirtuins contribute to cellular regulation of many metabolic functions related to aging, including DNA repair, autophagy, apoptosis, genome stability, and mitochondrial functions (Watroba & Szukiewicz, 2016).
The mTOR (mechanistic target of rapamycin) pathway directly influences protein synthesis, transcription, autophagy, metabolism, and organelle biogenesis and maintenance (Lipton & Sahin, 2014). Inhibition of the mTOR pathway has a protective effect against age-related diseases and extends lifespan in model organisms.
Several mTORinhibitors have been approved for a variety of clinical uses, and others are under clinical development. Adverse side effects currently hinder the use in healthy individuals, though encouraging early data suggest that drugs targeting the mTOR pathway could be widely used to slow aging and reduce age-related pathologies in humans (Johnson et al., 2013).
The microbiome is a population of microbes that form a "meta-organism" comprising of ten bacterial cells for each human cell. The microbiome plays a critical role in modulating the rate of the phenotype of aging. Diffusible molecules released by the bacteria directly affect cells of the host, and recent studies indicate that these interspecies signaling impacts host aging rate (Heintz & Mair, 2014).
Lack of micronutrients accelerates aging through mitochondrial decay, DNA damage, such as chromosome breaks, and metabolic disruption. Most people are characterized by inadequate dietary intake of vitamins and minerals, most likely due to excessive consumption of high calorie, micronutrient-poor, processed food. Poor nutrition is linked to increased risk of many age-related diseases, including cancer, heart disease, and diabetes (Ames, 2006).
Reduced ability to maintain a proteostasis and a functional proteome is one of the hallmarks
of aging. Under normal conditions, degradation of damaged proteins occurs through efficient proteolysis by the ubiquitin-proteasome system. With age, damaged and misfolded proteins accumulate due to the inefficient function of the proteasome pathway and impair cell function and tissue homeostasis. The accumulation of damaged proteins occurs in multiple age-associated pathologies such as Alzheimer's, Parkinson's or Huntington's disease (Vilchez et al., 2014).
The common denominator
All these mechanisms cause cellular damage, which eventually brings to autophagy and cell apoptosis. Damaged cells are replaced by tissue stem cells which divide every time to generate new tissue cells. Adult somatic stem cells reside in specific tissues within most of our organs, possess self-renewal capacity and can repair or replace cells and tissues damaged by injury or disease. These cells are stored in a protected environment niche, where they are connected to supporting cells, and kept dormant until an appropriate activating signal. Tissue-specific adult stem cells proliferate to replace senescent or deteriorated cells, maintaining the organ structure and function. They can repair mild injuries in various organs and tissues including the skin, liver, intestine, kidney, and bone marrow
(Montagnani et al., 2016). Aging coincides with a decreased regenerative capacity of stem cells and shortening of telomeres.
Telomere length and aging
Telomeres' functional role is to prevent gene loss from enzymatic nucleotide degradation and genome instability. Repetitive 5'-TTAGGG-3' sequences of 70 to 100 nucleotides bound to telomeric interacting proteins provide a protective cap of the chromosomal DNA, resembling the end of a shoelace (Fig. 2). To exert DNA repair mechanisms, single-stranded telomeric DNA form T-loop structures at the tip of chromosomes (Griffith et al., 1999). Normal diploid cells lose telomeric DNA during DNA replication due to the end replication problem. Thus, somatic cells have a certain lifespan until they reach a critically short length which will result in one of the following cell fates: senescence, cell death by apoptosis, genomic instability due to the fusion of telomeres. Fused chromosomes break unequally in mitosis, leading to genomic instability and chromosomal rearrangements during cell divisions (Muraki et al., 2012; O'Sullivan & Karlseder, 2010). On the other hand, cells with high proliferation capacity (i.e., germ cells, adult stem cells) manage to avoid chromosome erosion by expressing telomerase, an RNA-dependent DNA polymerase which binds
to telomeric DNA using the RNA complementary sequence as a template, allowing the maintenance of telomere length. Telomere length is established by the outcome of two opposing forces: on one side telomere erosion generated during cell division by the end-replication problem, exonucleases, and oxidative activities; on the other side telomere elongationby telomerase and recombination-based processes known as alternative lengthening of telomeres or ALT. Greider C.W., Blackburn E.H., and Szostack J. were the first to identify the role of telomerase in chromosomal elongation in eukaryotic cells (Greider & Blackburn, 1987) and the protective role of telomeric DNA from nucleotide degradation (Greider & Blackburn, 1985). These great discoveries were awarded The Nobel Prize in Physiology or Medicine 2009 and shed new light on disease mechanisms and aging.
Telomeres: biological clock
Recent studies indicate that telomere length, which can be affected by various lifestyle factors, can affect the pace of aging and onset of age-associated diseases. Stem cell dysfunction provoked by telomere shortening may be one of the mechanisms responsible for organismal aging in both humans and mice. Cell replication rate, cumulative exposure to damaging agents, low activity of the telomerase enzyme are the cause of erosion of telomeres (Aviv, 2008). Agents that cause DNA damage (such as oxidative, inflammatory, endocrine and other forms of biological stress), ROS, mitochondrial damage, DNA damage, lack of micronutrients, misfolded proteins accumulation, faulty microbiome signaling, insulin resistance, IGF-1 up-regulation, mTOR and sirtuins dis-regulation, cause damage at a cellular and tissue level (DiLoreto & Murphy, 2015). Accordingly, Funk et al. have found that telomerase expression restores dermal integrity to in vitro-aged fibroblasts in a reconstituted
skin model (Funk et al., 2000) and recently it was demonstrated that telomere re-lengthening through telomerase activation could reverse aging phenotype in mice (Jaskelioff et al., 2011). It was the first time in history to invert aging process in mammals. Previous studies suggested that female human fertility decreases with increased maternal age and that various adverse factors, including alterations in telomerase activity, can contribute to age-associated infertility in women. The fact that telomerase activity is regulated in a time- and location-dependent manner in both embryo and placental tissues, highlights it potential importance to the successful completion of pregnancy. Since maternal age is a crucial determining factor for the success of in vitro and in vivo fertilization, numerous studies have focused on telomerase activity and its correlation with mammalian fertilization, as well as the following cleavage and pre-implantation developmental processes. Associations between telomerase activity and pregnancy complications have been previously observed. Fragkiadaki et al. summarize and critically discuss evidence correlating telomerase activity with pregnancy complications (Fragkiadaki et al., 2016). Diverse lifestyle, environmental and nutritional factors influence positively or negatively telomere length. Some of the factors that negatively influence telomere length are smoking, alcohol, stress, vitamin D and C deficiency, obesity, oxidation and drugs (Shammas, 2011; Rode et al., 2015). On the other hand, nutrition, antioxidants, omega 3, exercise and telomerase activators are some of the factors that positively influence telomere length (Ornish et al., 2013).
Telomere shortening is a biological clock that indicates the pace of aging (Fig. 3). Telomere length at birth can vary from 5000-15000 pair bases, so the rate of telomere shortening is a more robust biomarker than the absolute telomere length. At birth, the average telomere length
Fig. 3. Telomeres shortening and cell division (Designua) (Adapted with permission by Shutterstock)
is 10.000 bps. At 20 years of age, the average telomere length is around 8.000 bps. Gradual loss of 35-150 base pairs per year leads to telomere length of 4500 bps where the chromosomes are unstable and the probabilities of serious health problems and death increase exponentially. A person that loses 35 bps instead of 150 bps per year, ages at a five times slower pace (Lansdorp et al., 1996; Okuda et al., 2002).
Rate of telomere shortening predicts longevity
The two main methods to assess telomere length are Polymerase chain reaction (PCR) and Quantitative Fluorescence in Situ Hybridization (Q-FISH). Various methods of TL measurement have been developed as reviewed by (Montpetit et al., 2015). Terminal Restriction Fragment (TRF) analysis which gives a crude analysis of MTL, and qPCR which estimates relative levels of MTL, have been widely used in large
population studies. Even though these are low-cost methods and require only minimum amount of biological sample, they present various limitations, including low sensitivity and lack of reproducibility. Importantly their inability to estimate the individual TL and detect critically short telomeres (<3kb) limits their application in diagnostics. Q-FISH provides the ability to quantify the telomere length in 92 individual telomeres, gives data on short telomeres percentage and can also be used as a clinical diagnostic tool (Fernandez-Alvira et al., 2016; Vera & Blasco, 2012). Moreover, "telomere free" ends, chromosomes lacking telomere sequences large enough to be detected, require a highly sensitive methods to be identified. Q-FISH of telomeric parts in metaphase chromosomes employs highlevel methodology and equipment used by skilled cytogeneticists to assess the 184 telomeric ends in individual samples. This method provides results on median length of single telomeres, the
percentage of short telomeres and percentage of critically short telomeres (<3kb), and gives an overview of the rate of telomere shortening and longevity (Vera et al., 2012; Ledford, 2007). It is known that the rate of increase of the percentage of short telomeres predicts longevity in mammals (Vera et al., 2012).
Toxplus, a spin-off company from University of Crete, and Metabolomic Medicine of Athens have developed a semi-automated worksheet with more than 100 participants, for providing telomere length statistics. In this database a big but not enormous dataset is made for a person, each person have at least 1840 measures for an analysis (10 metaphases x 23 chromosomes x 2 chains x 4 telomeres tails), chronological age and medical history (e.g. drugs, alcohol consumption, exposure on pesticides) (Tsoukalas et al., 2018). Basic statistics and figures for each of the participant such as: percentage of critically short telomeres (<3000 kbases), chromosome length distribution and graphs of biological age vs chronological person's age. The database consists of leucocyte telomere length measurements (LTL) of different age groups within a healthy adult population, through Q-FISH, creating a reference range based on age and percentile distribution of LTL. Repeated measurements at a distance of 6 months or a year can reveal the rate of change of the short telomeres, and response of patients to treatments, lifestyle, diet, supplementation and exercise modifications.
Telomerase activators are substances and methods that can activate the expression of the enzyme telomerase. Telomerase activation
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